anoles	anoles
centrarchidae	centrarchidae
checkConvergence	checkConvergence
computeESS	computeESS
continueMCMC	continueMCMC
estimateTimeMCMC	estimateTimeMCMC
extractCorrelation	extractCorrelation
fastSimmap	fastSimmap
getStartPointFromPosterior	getStartPointFromPosterior
likelihoodFunction	likelihoodFunction
logAnalyzer	logAnalyzer
makePrior	makePrior
mergePosterior	mergePosterior
mergeSimmap	mergeSimmap
plotPrior	plotPrior
plotRatematrix	plotRatematrix
plotRootValue	plotRootValue
print.ratematrix_multi_chain	print.ratematrix_multi_chain
print.ratematrix_multi_mcmc	print.ratematrix_multi_mcmc
print.ratematrix_prior_function	print.ratematrix_prior_function
print.ratematrix_prior_sample	print.ratematrix_prior_sample
print.ratematrix_single_chain	print.ratematrix_single_chain
print.ratematrix_single_mcmc	print.ratematrix_single_mcmc
ratematrix	ratematrix
ratematrixJointMCMC	ratematrixJointMCMC
ratematrixMCMC	ratematrixMCMC
readMCMC	readMCMC
readMCMC_Mk	readMCMC_Mk
samplePrior	samplePrior
simRatematrix	simRatematrix
testRatematrix	testRatematrix
