density.tm |
Log-likelihood Estimation using the Time Machine |
full.transitions |
Full Transition Matrix Computation |
mean.tm |
Log-likelihood Estimation using the Time Machine |
mu.mle |
Maximum-Likelihood Estimation of the Mutation Rate |
pdm |
Example Dataset |
pophistory |
History of Population Size |
pophistory.tm |
History of Population Size |
print.tm |
Log-likelihood Estimation using the Time Machine |
quantile.tm |
Log-likelihood Estimation using the Time Machine |
sample.pop |
Sample Populations from the Wright-Fisher Model |
stationary.dist |
Compute Stationary Distribution of a Markov Chain |
summary.tm |
Log-likelihood Estimation using the Time Machine |
time-dist |
Time to Coalescent Event or Mutation |
tm |
Log-likelihood Estimation using the Time Machine |
ttc |
Time to Coalescent Event or Mutation |
ttc.tm |
Time to Coalescent Event or Mutation |
ttm |
Time to Coalescent Event or Mutation |
ttm.tm |
Time to Coalescent Event or Mutation |