Intensive Care Unit Data with R


[Up] [Top]

Documentation for package ‘ricu’ version 0.1.3

Help Pages

A B C D E F G H I L M N P R S T U V W

-- A --

aggregate.id_tbl ICU class data utilities
anyDuplicated.id_tbl ICU class data utilities
apply_map Item callback utilities
as_concept Data Concepts
as_id_tbl Tabular ICU data classes
as_item Data items
as_src_env Data attach utilities
as_src_tbl Data attach utilities
as_ts_tbl Tabular ICU data classes
attach_src Data attach utilities
attach_src.character Data attach utilities
attach_src.src_cfg Data attach utilities
auto_load_src_names File system utilities

-- B --

binary_op Item callback utilities

-- C --

change_id Switch between id types
change_interval ICU class data utilities
collapse Time series utility functions
comp_na Item callback utilities
concept Data Concepts
config_paths File system utilities
convert_unit Item callback utilities

-- D --

data ICU datasets
data_col ICU class meta data utilities
data_dir File system utilities
data_var ICU class meta data utilities
data_vars ICU class meta data utilities
days Difftime utilities
downgrade_id Switch between id types
downgrade_id.id_tbl Switch between id types
downgrade_id.ts_tbl Switch between id types
download_src Data download utilities
download_src.src_cfg Data download utilities
dt_gforce ICU class data utilities
duplicated.id_tbl ICU class data utilities

-- E --

eicu ICU datasets
eicu_demo ICU datasets
expand Time series utility functions

-- F --

fill_gaps Time series utility functions
first_elem Utility functions

-- G --

gcs Concept callback functions
get_config File system utilities

-- H --

has_gaps Time series utility functions
has_no_gaps Time series utility functions
hirid ICU datasets
hop Time series utility functions
hours Difftime utilities

-- I --

id_col ICU class meta data utilities
id_tbl Tabular ICU data classes
id_var ICU class meta data utilities
id_vars ICU class meta data utilities
import_src Data import utilities
import_src.src_cfg Data import utilities
import_tbl Data import utilities
import_tbl.tbl_cfg Data import utilities
index_col ICU class meta data utilities
index_var ICU class meta data utilities
init_cncpt Data Concepts
init_cncpt.cncpt Data Concepts
init_cncpt.fct_cncpt Data Concepts
init_cncpt.num_cncpt Data Concepts
init_cncpt.rec_cncpt Data Concepts
init_itm Data items
init_itm.col_itm Data items
init_itm.fun_itm Data items
init_itm.hrd_itm Data items
init_itm.itm Data items
init_itm.rgx_itm Data items
init_itm.sel_itm Data items
interval ICU class meta data utilities
is_cncpt Data Concepts
is_concept Data Concepts
is_false Utility functions
is_id_tbl Tabular ICU data classes
is_item Data items
is_itm Data items
is_regular Time series utility functions
is_sorted ICU class data utilities
is_true Utility functions
is_ts_tbl Tabular ICU data classes
is_unique ICU class data utilities
is_val Utility functions
item Data items

-- L --

last_elem Utility functions
load_concepts Load concept data
load_concepts.character Load concept data
load_concepts.cncpt Load concept data
load_concepts.concept Load concept data
load_concepts.fct_cncpt Load concept data
load_concepts.item Load concept data
load_concepts.itm Load concept data
load_concepts.lgl_cncpt Load concept data
load_concepts.num_cncpt Load concept data
load_concepts.rec_cncpt Load concept data
load_dictionary Load concept dictionaries
load_difftime Low level functions for loading data
load_difftime.character Low level functions for loading data
load_difftime.eicu_tbl Low level functions for loading data
load_difftime.hirid_tbl Low level functions for loading data
load_difftime.mimic_tbl Low level functions for loading data
load_id Load data as 'id_tbl' or 'ts_tbl' objects
load_id.character Load data as 'id_tbl' or 'ts_tbl' objects
load_id.default Load data as 'id_tbl' or 'ts_tbl' objects
load_id.fun_itm Load data as 'id_tbl' or 'ts_tbl' objects
load_id.itm Load data as 'id_tbl' or 'ts_tbl' objects
load_id.src_tbl Load data as 'id_tbl' or 'ts_tbl' objects
load_src Low level functions for loading data
load_src.character Low level functions for loading data
load_src.src_tbl Low level functions for loading data
load_src_cfg Load configuration for a data source
load_ts Load data as 'id_tbl' or 'ts_tbl' objects
load_ts.character Load data as 'id_tbl' or 'ts_tbl' objects
load_ts.default Load data as 'id_tbl' or 'ts_tbl' objects
load_ts.fun_itm Load data as 'id_tbl' or 'ts_tbl' objects
load_ts.itm Load data as 'id_tbl' or 'ts_tbl' objects
load_ts.src_tbl Load data as 'id_tbl' or 'ts_tbl' objects

-- M --

max_or_na Utility functions
meta_vars ICU class meta data utilities
mimic ICU datasets
mimic_demo ICU datasets
mins Difftime utilities
min_or_na Utility functions
msg_progress Message signaling nested with progress reporting

-- N --

new_cncpt Data Concepts
new_concept Data Concepts
new_item Data items
new_itm Data items
new_src_env Data attach utilities
new_src_tbl Data attach utilities
not_val Utility functions

-- P --

pafi Concept callback functions

-- R --

read_psv Read and write utilities
remove_gaps Time series utility functions
rename_cols ICU class data utilities
replace_na Utility functions
rm_cols ICU class data utilities
rm_na ICU class data utilities

-- S --

secs Difftime utilities
sed Concept callback functions
setup_src_env Data attach utilities
setup_src_env.src_cfg Data attach utilities
set_config File system utilities
slide Time series utility functions
slide_index Time series utility functions
sofa_cardio SOFA score label
sofa_cns SOFA score label
sofa_coag SOFA score label
sofa_liver SOFA score label
sofa_renal SOFA score label
sofa_resp SOFA score label
sofa_score SOFA score label
sort.id_tbl ICU class data utilities
src_data_avail File system utilities
src_data_dir File system utilities
stay_windows Stays

-- T --

time_step ICU class meta data utilities
time_unit ICU class meta data utilities
time_vars ICU class meta data utilities
transform_fun Item callback utilities
ts_tbl Tabular ICU data classes

-- U --

unique.id_tbl ICU class data utilities
upgrade_id Switch between id types
upgrade_id.id_tbl Switch between id types
upgrade_id.ts_tbl Switch between id types
urine24 Concept callback functions

-- V --

validate_tbl Tabular ICU data classes
vaso60 Concept callback functions
vent Concept callback functions

-- W --

weeks Difftime utilities
write_psv Read and write utilities