Null Models for Categorical and Continuous Community Matrices


[Up] [Top]

Documentation for package ‘nullcat’ version 0.1.0

Help Pages

c0cat Column-constrained categorical randomization (c0cat)
curvecat Categorical curveball randomization (curvecat)
nullcat Categorical matrix randomization
nullcat_batch Generate a batch of null matrices using nullcat()
nullcat_commsim Nullcat-based commsim (non-sequential)
nullcat_commsim_seq Nullcat-based commsim (sequential / Markov chain)
nullcat_methods Supported nullcat methods
quantize Stratified randomization of a quantitative community matrix
quantize_batch Generate a batch of null matrices using quantize()
quantize_commsim Quantize-based commsim (non-sequential)
quantize_commsim_seq Quantile-based quantize commsim (sequential / Markov chain)
quantize_prep Prepare stratified null model overhead for quantize()
r0cat Row-constrained categorical randomization (r0cat)
stratify Bin quantitative data into strata
suggest_n_iter Suggest a reasonable n_iter for a randomization
swapcat Categorical swap randomization (swapcat)
trace_cat Trace diagnostics for categorical randomizations
tswapcat Trial-swap categorical randomization (tswapcat)