xBiproject | R Documentation |
xBiproject
is supposed to obtain a projected graph from a
bipartitle graph.
xBiproject(g, verbose = TRUE)
g |
an object of class "igraph" (or "graphNEL") for a bipartitel graph with a 'type' node attribute |
verbose |
logical to indicate whether the messages will be displayed in the screen. By default, it sets to true for display |
It returns an igraph object.
The input graph will has an equal weight if there is no 'weight' edge attribute associated with
xBiproject
# 1) generate a random bipartite graph set.seed(123) g <- sample_bipartite(100, 50, p=0.05) V(g)$name <- V(g) ## Not run: # 2) obtain its projected graph ig <- xBiproject(g) # 3) estimate pairwise affiinity between nodes mat <- xRWkernel(ig) ## End(Not run)