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Last updated on 2026-08-19 23:51:54 CEST.
| Package | OK | NOTE | ERROR |
|---|---|---|---|
| Achilles | 11 | 2 | |
| Eunomia | 12 | 1 |
Current CRAN status: OK: 11, NOTE: 2
Version: 1.7.2
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘Frank DeFalco <fdefalco@ohdsi.org>’
Found the following (possibly) invalid file URI:
URI: README-developers.md
From: inst/doc/GettingStarted.pdf
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Current CRAN status: OK: 12, ERROR: 1
Version: 2.1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [5s/46s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(Eunomia)
> test_check("Eunomia")
trying URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'
Saving _problems/test-DBI-2.R
trying URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'
Saving _problems/test-DBI-13.R
trying URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'
Saving _problems/test-EunomiaData-9.R
trying URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/Synthea27Nj/Synthea27Nj_5.4.zip'
Saving _problems/test-EunomiaData-14.R
adding: home/hornik/tmp/scratch/RtmpBFTgxc/file14c47440f86c57somefile.txt (stored 0%)
trying URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'
Saving _problems/test-basic-9.R
trying URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'
Saving _problems/test-basic-13.R
trying URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'
Saving _problems/test-basic-21.R
trying URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'
Saving _problems/test-basic-30.R
trying URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'
Saving _problems/test-basic-36.R
trying URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'
Saving _problems/test-basic-47.R
trying URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'
Saving _problems/test-basic-54.R
trying URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'
Saving _problems/test-basic-75.R
[ FAIL 12 | WARN 12 | SKIP 0 | PASS 5 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-DBI.R:2:3'): dbConnect works with sqlite ───────────────────────
Error in `utils::download.file(url = paste(baseUrl, datasetName, zipName, sep = "/"), destfile = file.path(pathToData, zipName))`: cannot open URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'
Backtrace:
▆
1. ├─DBI::dbConnect(...) at test-DBI.R:2:3
2. ├─DBI::dbConnect(...)
3. │ └─RSQLite (local) .local(drv, ...)
4. │ └─base::stopifnot(length(dbname) == 1, !is.na(dbname))
5. └─Eunomia::getDatabaseFile(...)
6. └─Eunomia::downloadEunomiaData(...)
7. └─utils::download.file(...)
── Error ('test-DBI.R:13:3'): dbConnect works with duckdb ──────────────────────
Error in `utils::download.file(url = paste(baseUrl, datasetName, zipName, sep = "/"), destfile = file.path(pathToData, zipName))`: cannot open URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'
Backtrace:
▆
1. ├─DBI::dbConnect(...) at test-DBI.R:13:3
2. ├─DBI::dbConnect(...)
3. │ └─duckdb (local) .local(drv, ...)
4. │ └─duckdb:::path_normalize(dbdir)
5. └─Eunomia::getDatabaseFile(...)
6. └─Eunomia::downloadEunomiaData(...)
7. └─utils::download.file(...)
── Error ('test-EunomiaData.R:9:3'): Overwrite test for downloadEunomiaData ────
Error in `utils::download.file(url = paste(baseUrl, datasetName, zipName, sep = "/"), destfile = file.path(pathToData, zipName))`: cannot open URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'
Backtrace:
▆
1. └─Eunomia::downloadEunomiaData(datasetName = "GiBleed", overwrite = T) at test-EunomiaData.R:9:3
2. └─utils::download.file(...)
── Error ('test-EunomiaData.R:14:3'): Eunomia works with 5.4 ───────────────────
Error in `utils::download.file(url = paste(baseUrl, datasetName, zipName, sep = "/"), destfile = file.path(pathToData, zipName))`: cannot open URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/Synthea27Nj/Synthea27Nj_5.4.zip'
Backtrace:
▆
1. └─Eunomia::getDatabaseFile(...) at test-EunomiaData.R:14:3
2. └─Eunomia::downloadEunomiaData(...)
3. └─utils::download.file(...)
── Failure ('test-basic.R:9:3'): Dataset not downloaded and not loaded into SQLite ──
`getDatabaseFile(datasetName = "GiBleed")` threw an error.
Message: cannot open URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'
Class: simpleError/error/condition
Backtrace:
▆
1. ├─testthat::expect_error(...) at test-basic.R:9:3
2. │ └─testthat:::quasi_capture(...)
3. │ ├─testthat (local) .capture(...)
4. │ │ └─base::withCallingHandlers(...)
5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
6. └─Eunomia::getDatabaseFile(datasetName = "GiBleed")
7. └─Eunomia::downloadEunomiaData(...)
8. └─utils::download.file(...)
── Error ('test-basic.R:13:3'): Dataset downloaded but not loaded into SQLite ──
Error in `utils::download.file(url = paste(baseUrl, datasetName, zipName, sep = "/"), destfile = file.path(pathToData, zipName))`: cannot open URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'
Backtrace:
▆
1. └─Eunomia::downloadEunomiaData(datasetName = "GiBleed") at test-basic.R:13:3
2. └─utils::download.file(...)
── Error ('test-basic.R:21:3'): Get connection details ─────────────────────────
Error in `utils::download.file(url = paste(baseUrl, datasetName, zipName, sep = "/"), destfile = file.path(pathToData, zipName))`: cannot open URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'
Backtrace:
▆
1. └─Eunomia::getEunomiaConnectionDetails() at test-basic.R:21:3
2. └─Eunomia::getDatabaseFile(...)
3. └─Eunomia::downloadEunomiaData(...)
4. └─utils::download.file(...)
── Error ('test-basic.R:30:3'): Connect ────────────────────────────────────────
Error in `utils::download.file(url = paste(baseUrl, datasetName, zipName, sep = "/"), destfile = file.path(pathToData, zipName))`: cannot open URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'
Backtrace:
▆
1. ├─DatabaseConnector::connect(getEunomiaConnectionDetails()) at test-basic.R:30:3
2. └─Eunomia::getEunomiaConnectionDetails()
3. └─Eunomia::getDatabaseFile(...)
4. └─Eunomia::downloadEunomiaData(...)
5. └─utils::download.file(...)
── Error ('test-basic.R:36:3'): Table names and column names case ──────────────
Error in `utils::download.file(url = paste(baseUrl, datasetName, zipName, sep = "/"), destfile = file.path(pathToData, zipName))`: cannot open URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'
Backtrace:
▆
1. ├─DatabaseConnector::connect(getEunomiaConnectionDetails()) at test-basic.R:36:3
2. └─Eunomia::getEunomiaConnectionDetails()
3. └─Eunomia::getDatabaseFile(...)
4. └─Eunomia::downloadEunomiaData(...)
5. └─utils::download.file(...)
── Error ('test-basic.R:47:3'): Query ──────────────────────────────────────────
Error in `utils::download.file(url = paste(baseUrl, datasetName, zipName, sep = "/"), destfile = file.path(pathToData, zipName))`: cannot open URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'
Backtrace:
▆
1. ├─DatabaseConnector::connect(getEunomiaConnectionDetails()) at test-basic.R:47:3
2. └─Eunomia::getEunomiaConnectionDetails()
3. └─Eunomia::getDatabaseFile(...)
4. └─Eunomia::downloadEunomiaData(...)
5. └─utils::download.file(...)
── Error ('test-basic.R:54:3'): Cohort construction ────────────────────────────
Error in `utils::download.file(url = paste(baseUrl, datasetName, zipName, sep = "/"), destfile = file.path(pathToData, zipName))`: cannot open URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'
Backtrace:
▆
1. └─Eunomia::getEunomiaConnectionDetails() at test-basic.R:54:3
2. └─Eunomia::getDatabaseFile(...)
3. └─Eunomia::downloadEunomiaData(...)
4. └─utils::download.file(...)
── Error ('test-basic.R:75:3'): deprecated arguments in createCohorts ──────────
Error in `utils::download.file(url = paste(baseUrl, datasetName, zipName, sep = "/"), destfile = file.path(pathToData, zipName))`: cannot open URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'
Backtrace:
▆
1. └─Eunomia::getEunomiaConnectionDetails() at test-basic.R:75:3
2. └─Eunomia::getDatabaseFile(...)
3. └─Eunomia::downloadEunomiaData(...)
4. └─utils::download.file(...)
[ FAIL 12 | WARN 12 | SKIP 0 | PASS 5 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.