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Last updated on 2026-07-17 11:50:37 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.10.0 | 6.19 | 141.46 | 147.65 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.10.0 | 4.99 | 100.93 | 105.92 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.10.0 | 11.00 | 391.49 | 402.49 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 2.10.0 | 104.38 | OK | |||
| r-devel-windows-x86_64 | 2.10.0 | 11.00 | 148.00 | 159.00 | OK | |
| r-patched-linux-x86_64 | 2.10.0 | 8.11 | 132.98 | 141.09 | OK | |
| r-release-linux-x86_64 | 2.10.0 | 4.96 | 133.24 | 138.20 | OK | |
| r-release-macos-arm64 | 2.10.0 | 2.00 | 33.00 | 35.00 | OK | |
| r-release-macos-x86_64 | 2.10.0 | 5.00 | 165.00 | 170.00 | OK | |
| r-release-windows-x86_64 | 2.10.0 | 12.00 | 156.00 | 168.00 | OK | |
| r-oldrel-macos-arm64 | 2.10.0 | 1.00 | 36.00 | 37.00 | ERROR | |
| r-oldrel-macos-x86_64 | 2.10.0 | 5.00 | 133.00 | 138.00 | OK | |
| r-oldrel-windows-x86_64 | 2.10.0 | 14.00 | 179.00 | 193.00 | OK |
Version: 2.10.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [14s/8s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(loo)
This is loo version 2.10.0
- Online documentation and vignettes at mc-stan.org/loo
- As of v2.0.0 loo defaults to 1 core but we recommend using as many as possible. Use the 'cores' argument or set options(mc.cores = NUM_CORES) for an entire session.
> library(testthat)
Attaching package: 'testthat'
The following object is masked from 'package:loo':
compare
> Sys.setenv("R_TESTS" = "")
> test_check("loo")
Starting 2 test processes.
> test_loo_and_waic.R:
> test_loo_and_waic.R: *** caught segfault ***
> test_loo_and_waic.R: address 0x110, cause 'invalid permissions'
> test_loo_and_waic.R:
> test_loo_and_waic.R: *** caught segfault ***
> test_loo_and_waic.R: address 0x110, cause 'invalid permissions'
> test_loo_and_waic.R:
> test_loo_and_waic.R: Traceback:
> test_loo_and_waic.R: 1: outer(X, Y)
> test_loo_and_waic.R: 2: -theta %o% x
> test_loo_and_waic.R: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_and_waic.R: 4: psis_smooth_tail(lw_tail, cutoff)
> test_loo_and_waic.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_and_waic.R: 6: FUN(X[[i]], ...)
> test_loo_and_waic.R: 7: lapply(X = S, FUN = FUN, ...)
> test_loo_and_waic.R: 8: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 10: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
> test_loo_and_waic.R: 12: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
> test_loo_and_waic.R: 13: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
> test_loo_and_waic.R: 14: FUN(X[[i]], ...)
> test_loo_and_waic.R: 15: lapply(seq_len(cores), inner.do)
> test_loo_and_waic.R: 16: parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_and_waic.R: 17: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, method = method)
> test_loo_and_waic.R: 18: importance_sampling.array(log_ratios = -x, r_eff = r_eff, cores = cores, method = is_method)
> test_loo_and_waic.R: 19: loo.array(LLarr, r_eff = r_eff_arr, cores = 2)
> test_loo_and_waic.R: 20: loo(LLarr, r_eff = r_eff_arr, cores = 2)
> test_loo_and_waic.R: 21: withCallingHandlers(expr, warning = function(w) if (inherits(w, classes)) tryInvokeRestart("muffleWarning"))
> test_loo_and_waic.R: 22: suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2))
> test_loo_and_waic.R: 23: eval(code, test_env)
> test_loo_and_waic.R: 24: eval(code, test_env)
> test_loo_and_waic.R: 25: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_and_waic.R: 26: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 27: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 28: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 29: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_and_waic.R: 30: doWithOneRestart(return(expr), restart)
> test_loo_and_waic.R: 31: withOneRestart(expr, restarts[[1L]])
> test_loo_and_waic.R: 32: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_and_waic.R: 33: test_code(code, parent.frame())
> test_loo_and_waic.R: 34: test_that("loo with cores=1 and cores=2 gives same results", { loo2 <- suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2)) expect_equal(loo1$estimates, loo2$estimates) })
> test_loo_and_waic.R: 35: eval(code, test_env)
> test_loo_and_waic.R: 36: eval(code, test_env)
> test_loo_and_waic.R: 37: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_and_waic.R: 38: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 39: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 40: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 41: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_and_waic.R: 42: doWithOneRestart(return(expr), restart)
> test_loo_and_waic.R: 43: withOneRestart(expr, restarts[[1L]])
> test_loo_and_waic.R: 44: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_and_waic.R: 45: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
> test_loo_and_waic.R: 46: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
> test_loo_and_waic.R: 47: test_one_file(path, env = the$testing_env, shuffle = shuffle)
> test_loo_and_waic.R: 48: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 49: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 50: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 51: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
> test_loo_and_waic.R: 52: with_reporter(multi, test_one_file(path, env = the$testing_env, shuffle = shuffle))
> test_loo_and_waic.R: 53: asNamespace("testthat")$queue_task(path, shuffle)
> test_loo_and_waic.R: 54: (function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)})(base::quote("test_loo_and_waic.R"), base::quote(FALSE))
> test_loo_and_waic.R: 55: (function (what, args, quote = FALSE, envir = parent.frame()) { if (!is.list(args)) stop("second argument must be a list") if (quote) args <- lapply(args, enquote) .Internal(do.call(what, args, envir))})(base::quote(function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)}), base::quote(list("test_loo_and_waic.R", FALSE)), envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_and_waic.R: 56: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpFIq2sk/callr-fun-13ead7ece83b6"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE)
> test_loo_and_waic.R: 57: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpFIq2sk/callr-fun-13ead7ece83b6"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead282962c4", compress = FALSE)
> test_loo_and_waic.R: 58: base::withCallingHandlers({ { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpFIq2sk/callr-fun-13ead7ece83b6"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead282962c4", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead282962c4", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead282962c4", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })})
> test_loo_and_waic.R: 59: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 60: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 61: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
> test_loo_and_waic.R: 62: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 63: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]])
> test_loo_and_waic.R: 64: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 65: base::tryCatch(base::withCallingHandlers({ { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpFIq2sk/callr-fun-13ead7ece83b6"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead282962c4", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead282962c4", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2))
> test_loo_and_waic.R: e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead282962c4", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })}), error = function(e) { { NULL NULL } if (FALSE) { base::try(base::stop(e)) } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()}, interrupt = function(e) { { NULL NULL } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()})
> test_loo_and_waic.R: An irrecoverable exception occurred. R is aborting now ...
> test_loo_and_waic.R:
> test_loo_and_waic.R: Traceback:
> test_loo_and_waic.R: 1: outer(X, Y)
> test_loo_and_waic.R: 2: -theta %o% x
> test_loo_and_waic.R: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_and_waic.R: 4: psis_smooth_tail(lw_tail, cutoff)
> test_loo_and_waic.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_and_waic.R: 6: FUN(X[[i]], ...)
> test_loo_and_waic.R: 7: lapply(X = S, FUN = FUN, ...)
> test_loo_and_waic.R: 8: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 10: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
> test_loo_and_waic.R: 12: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
> test_loo_and_waic.R: 13: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
> test_loo_and_waic.R: 14: FUN(X[[i]], ...)
> test_loo_and_waic.R: 15: lapply(seq_len(cores), inner.do)
> test_loo_and_waic.R: 16: parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_and_waic.R: 17: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, method = method)
> test_loo_and_waic.R: 18: importance_sampling.array(log_ratios = -x, r_eff = r_eff, cores = cores, method = is_method)
> test_loo_and_waic.R: 19: loo.array(LLarr, r_eff = r_eff_arr, cores = 2)
> test_loo_and_waic.R: 20: loo(LLarr, r_eff = r_eff_arr, cores = 2)
> test_loo_and_waic.R: 21: withCallingHandlers(expr, warning = function(w) if (inherits(w, classes)) tryInvokeRestart("muffleWarning"))
> test_loo_and_waic.R: 22: suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2))
> test_loo_and_waic.R: 23: eval(code, test_env)
> test_loo_and_waic.R: 24: eval(code, test_env)
> test_loo_and_waic.R: 25: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_and_waic.R: 26: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 27: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 28: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 29: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_and_waic.R: 30: doWithOneRestart(return(expr), restart)
> test_loo_and_waic.R: 31: withOneRestart(expr, restarts[[1L]])
> test_loo_and_waic.R: 32: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_and_waic.R: 33: test_code(code, parent.frame())
> test_loo_and_waic.R: 34: test_that("loo with cores=1 and cores=2 gives same results", { loo2 <- suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2)) expect_equal(loo1$estimates, loo2$estimates) })
> test_loo_and_waic.R: 35: eval(code, test_env)
> test_loo_and_waic.R: 36: eval(code, test_env)
> test_loo_and_waic.R: 37: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_and_waic.R: 38: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 39: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 40: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 41: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_and_waic.R: 42: doWithOneRestart(return(expr), restart)
> test_loo_and_waic.R: 43: withOneRestart(expr, restarts[[1L]])
> test_loo_and_waic.R: 44: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env)
> test_loo_and_waic.R: new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_and_waic.R: 45: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
> test_loo_and_waic.R: 46: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
> test_loo_and_waic.R: 47: test_one_file(path, env = the$testing_env, shuffle = shuffle)
> test_loo_and_waic.R: 48: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 49: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 50: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 51: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
> test_loo_and_waic.R: 52: with_reporter(multi, test_one_file(path, env = the$testing_env, shuffle = shuffle))
> test_loo_and_waic.R: 53: asNamespace("testthat")$queue_task(path, shuffle)
> test_loo_and_waic.R: 54: (function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)})(base::quote("test_loo_and_waic.R"), base::quote(FALSE))
> test_loo_and_waic.R: 55: (function (what, args, quote = FALSE, envir = parent.frame()) { if (!is.list(args)) stop("second argument must be a list") if (quote) args <- lapply(args, enquote) .Internal(do.call(what, args, envir))})(base::quote(function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)}), base::quote(list("test_loo_and_waic.R", FALSE)), envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_and_waic.R: 56: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpFIq2sk/callr-fun-13ead7ece83b6"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE)
> test_loo_and_waic.R: 57: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpFIq2sk/callr-fun-13ead7ece83b6"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead282962c4", compress = FALSE)
> test_loo_and_waic.R: 58: base::withCallingHandlers({ { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpFIq2sk/callr-fun-13ead7ece83b6"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead282962c4", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead282962c4", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead282962c4", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })})
> test_loo_and_waic.R: 59: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 60: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 61: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
> test_loo_and_waic.R: 62: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 63: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]])
> test_loo_and_waic.R: 64: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 65: base::tryCatch(base::withCallingHandlers({ { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpFIq2sk/callr-fun-13ead7ece83b6"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead282962c4", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead282962c4", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data)
> test_loo_and_waic.R: utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead282962c4", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })}), error = function(e) { { NULL NULL } if (FALSE) { base::try(base::stop(e)) } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()}, interrupt = function(e) { { NULL NULL } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()})
> test_loo_and_waic.R: An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test_loo_and_waic-30.R
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: *** caught segfault ***
> test_loo_predictive_metric.R: address 0x110, cause 'invalid permissions'
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: *** caught segfault ***
> test_loo_predictive_metric.R: address 0x110, cause 'invalid permissions'
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: Traceback:
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: Traceback:
> test_loo_predictive_metric.R: 1: 1: outer(X, Y)outer(X, Y)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 2: 2: -theta %o% x-theta %o% x
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 3: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 4: 4: psis_smooth_tail(lw_tail, cutoff)psis_smooth_tail(lw_tail, cutoff)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 5: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 6: 6: FUN(X[[i]], ...)FUN(X[[i]], ...)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 7: 7: lapply(X = S, FUN = FUN, ...)lapply(X = S, FUN = FUN, ...)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 8: 8: doTryCatch(return(expr), name, parentenv, handler)doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 9: 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 10: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 11: tryCatch(expr, error = function(e) {10: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e)) invisible(structure(msg, class = "try-error", condition = e))})})
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 12: 12: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
> test_loo_predictive_metric.R: 13: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
> test_loo_predictive_metric.R: 14: FUN(X[[i]], ...)
> test_loo_predictive_metric.R: 15: lapply(seq_len(cores), inner.do)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 13: 16: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 14: FUN(X[[i]], ...)
> test_loo_predictive_metric.R: 15: 17: lapply(seq_len(cores), inner.do)
> test_loo_predictive_metric.R: 16: parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_predictive_metric.R: 17: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, method = method)
> test_loo_predictive_metric.R: 18:
> test_loo_predictive_metric.R: importance_sampling.matrix(log_ratios, ..., r_eff = r_eff, cores = cores, method = "psis")
> test_loo_predictive_metric.R: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, method = method)
> test_loo_predictive_metric.R: 18: 19: importance_sampling.matrix(log_ratios, ..., r_eff = r_eff, cores = cores, psis.matrix(-LL, r_eff = r_eff, cores = 2) method = "psis")
> test_loo_predictive_metric.R: 19: psis.matrix(-LL, r_eff = r_eff, cores = 2)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 20: 20: psis(-LL, r_eff = r_eff, cores = 2)psis(-LL, r_eff = r_eff, cores = 2)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 21: 21: eval(code, test_env)eval(code, test_env)
> test_loo_predictive_metric.R: 22: eval(code, test_env)
> test_loo_predictive_metric.R: 23:
> test_loo_predictive_metric.R: withCallingHandlers({22: eval(code, test_env)eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations
> test_loo_predictive_metric.R: if (snapshot_skipped) {23: skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty()withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } }}, expectation = handle_expectation, packageNotFoundError = function(e) { else if (!new_expectations && skip_on_empty) { if (on_cran()) { skip_empty() skip(paste0("{", e$package, "} is not installed.")) } }}, expectation = handle_expectation, packageNotFoundError = function(e) {}, snapshot_on_cran = function(cnd) { if (on_cran()) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_predictive_metric.R: skip(paste0("{", e$package, "} is not installed."))24: }doTryCatch(return(expr), name, parentenv, handler)}, snapshot_on_cran = function(cnd) {
> test_loo_predictive_metric.R: snapshot_skipped <<- TRUE25: invokeRestart("muffle_cran_snapshot")tryCatchOne(expr, names, parentenv, handlers[[1L]])}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_predictive_metric.R: 24: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 26: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 27: 25: tryCatch(withCallingHandlers({tryCatchOne(expr, names, parentenv, handlers[[1L]]) eval(code, test_env)
> test_loo_predictive_metric.R: new_expectations <- the$test_expectations > starting_expectations26: if (snapshot_skipped) {tryCatchList(expr, classes, parentenv, handlers) skip("On CRAN")
> test_loo_predictive_metric.R: }27: else if (!new_expectations && skip_on_empty) {tryCatch(withCallingHandlers({ skip_empty() eval(code, test_env) } new_expectations <- the$test_expectations > starting_expectations}, expectation = handle_expectation, packageNotFoundError = function(e) { if (snapshot_skipped) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() } snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_predictive_metric.R: 28: doWithOneRestart(return(expr), restart)
> test_loo_predictive_metric.R: 29: }, expectation = handle_expectation, packageNotFoundError = function(e) {withOneRestart(expr, restarts[[1L]]) if (on_cran()) {
> test_loo_predictive_metric.R: skip(paste0("{", e$package, "} is not installed."))30: }withRestarts(tryCatch(withCallingHandlers({}, snapshot_on_cran = function(cnd) { eval(code, test_env) snapshot_skipped <<- TRUE new_expectations <- the$test_expectations > starting_expectations invokeRestart("muffle_cran_snapshot") if (snapshot_skipped) {}, skip = handle_skip, warning = handle_warning, message = handle_message, skip("On CRAN") error = handle_error, interrupt = handle_interrupt), error = handle_fatal) }
> test_loo_predictive_metric.R: 28: doWithOneRestart(return(expr), restart)
> test_loo_predictive_metric.R: else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) {29: withOneRestart(expr, restarts[[1L]])
> test_loo_predictive_metric.R: 30: withRestarts(tryCatch(withCallingHandlers({ snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_predictive_metric.R: 31: test_code(code = exprs, env = env, reporter = get_reporter() %||% eval(code, test_env) StopReporter$new()) new_expectations <- the$test_expectations > starting_expectations
> test_loo_predictive_metric.R: if (snapshot_skipped) {32: skip("On CRAN")source_file(path, env = env(env), desc = desc, shuffle = shuffle, } error_call = error_call) else if (!new_expectations && skip_on_empty) {
> test_loo_predictive_metric.R: skip_empty()33: }test_one_file(path, env = the$testing_env, shuffle = shuffle)}, expectation = handle_expectation, packageNotFoundError = function(e) {
> test_loo_predictive_metric.R: if (on_cran()) {34: skip(paste0("{", e$package, "} is not installed."))doTryCatch(return(expr), name, parentenv, handler) }
> test_loo_predictive_metric.R: }, snapshot_on_cran = function(cnd) {35: snapshot_skipped <<- TRUEtryCatchOne(expr, names, parentenv, handlers[[1L]]) invokeRestart("muffle_cran_snapshot")
> test_loo_predictive_metric.R: }, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_predictive_metric.R: 36: 31: tryCatchList(expr, classes, parentenv, handlers)test_code(code = exprs, env = env, reporter = get_reporter() %||%
> test_loo_predictive_metric.R: StopReporter$new())37:
> test_loo_predictive_metric.R: tryCatch(code, testthat_abort_reporter = function(cnd) {32: cat(conditionMessage(cnd), "\n")source_file(path, env = env(env), desc = desc, shuffle = shuffle, NULL error_call = error_call)})
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 33: 38: test_one_file(path, env = the$testing_env, shuffle = shuffle)with_reporter(multi, test_one_file(path, env = the$testing_env,
> test_loo_predictive_metric.R: shuffle = shuffle))34:
> test_loo_predictive_metric.R: doTryCatch(return(expr), name, parentenv, handler)39:
> test_loo_predictive_metric.R: asNamespace("testthat")$queue_task(path, shuffle)
> test_loo_predictive_metric.R: 40: (function (path, shuffle) {35: asNamespace("testthat")$queue_task(path, shuffle)tryCatchOne(expr, names, parentenv, handlers[[1L]])})(base::quote("test_loo_predictive_metric.R"), base::quote(FALSE))
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 41: (function (what, args, quote = FALSE, envir = parent.frame()) 36: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 37: tryCatch(code, testthat_abort_reporter = function(cnd) {{ if (!is.list(args)) stop("second argument must be a list") if (quote) args <- lapply(args, enquote) .Internal(do.call(what, args, envir))})(base::quote(function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle) cat(conditionMessage(cnd), "\n")}), base::quote(list("test_loo_predictive_metric.R", FALSE)), NULL envir = base::quote(<environment>), quote = base::quote(TRUE))})
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 42: 38: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpFIq2sk/callr-fun-13ead787d96c"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE)
> test_loo_predictive_metric.R: with_reporter(multi, test_one_file(path, env = the$testing_env, 43: shuffle = shuffle))base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpFIq2sk/callr-fun-13ead787d96c"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead67d34550", compress = FALSE)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 39: 44: asNamespace("testthat")$queue_task(path, shuffle)base::withCallingHandlers({
> test_loo_predictive_metric.R: {40: NULL(function (path, shuffle) NULL{ } asNamespace("testthat")$queue_task(path, shuffle) base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpFIq2sk/callr-fun-13ead787d96c"), })(base::quote("test_loo_predictive_metric.R"), base::quote(FALSE)) base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv,
> test_loo_predictive_metric.R: quote = TRUE), file = "/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead67d34550", 41: compress = FALSE) base::flush(base::stdout())
> test_loo_predictive_metric.R: (function (what, args, quote = FALSE, envir = parent.frame()) { if (!is.list(args)) stop("second argument must be a list") base::flush(base::stderr()) { NULL NULL } if (quote) base::invisible() args <- lapply(args, enquote)}, error = function(e) { .Internal(do.call(what, args, envir)) {})(base::quote(function (path, shuffle) callr_data <- base::as.environment("tools:callr")$`__callr_data__`{ err <- callr_data$err asNamespace("testthat")$queue_task(path, shuffle) if (FALSE) {}), base::quote(list("test_loo_predictive_metric.R", FALSE)), base::assign(".Traceback", base::.traceback(4), envir = callr_data) envir = base::quote(<environment>), quote = base::quote(TRUE)) utils::dump.frames("__callr_dump__")
> test_loo_predictive_metric.R: base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, 42: envir = callr_data)base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpFIq2sk/callr-fun-13ead787d96c"), base::rm("__callr_dump__", envir = .GlobalEnv) base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, } quote = TRUE) e <- err$process_call(e)
> test_loo_predictive_metric.R: e2 <- err$new_error("error in callr subprocess")43: class <- base::classbase::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpFIq2sk/callr-fun-13ead787d96c"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead67d34550", compress = FALSE)
> test_loo_predictive_metric.R: 44: base::withCallingHandlers({ class(e2) <- base::c("callr_remote_error", class(e2)) { e2 <- err$add_trace_back(e2) NULL cut <- base::which(e2$trace$scope == "global")[1] NULL if (!base::is.na(cut)) { } e2$trace <- e2$trace[-(1:cut), ] base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpFIq2sk/callr-fun-13ead787d96c"), } base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, if (callr_data$has_otel) { quote = TRUE), file = "/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead67d34550", callr_data$otel_span$record_exception(e2) compress = FALSE) } base::flush(base::stdout()) base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead67d34550", base::flush(base::stderr()) ".error")) { } NULL}, interrupt = function(e) { NULL { } callr_data <- base::as.environment("tools:callr")$`__callr_data__` base::invisible() err <- callr_data$err}, error = function(e) { if (FALSE) { { base::assign(".Traceback", base::.traceback(4), envir = callr_data) callr_data <- base::as.environment("tools:callr")$`__callr_data__` utils::dump.frames("__callr_dump__") err <- callr_data$err base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, if (FALSE) { envir = callr_data) base::assign(".Traceback", base::.traceback(4), envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] e2$trace <- e2$trace[-(1:cut), ] } } if (callr_data$has_otel) { if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) callr_data$otel_span$record_exception(e2) } } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead67d34550", base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead67d34550", ".error")) ".error")) } }}, callr_message = function(e) {}, interrupt = function(e) { base::try({ { callr_data <- base::as.environment("tools:callr")$`__callr_data__` callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib err <- callr_data$err if (base::is.null(e$code)) { if (FALSE) { e$code <- "301" base::assign(".Traceback", base::.traceback(4), envir = callr_data) } utils::dump.frames("__callr_dump__") msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, NULL))) envir = callr_data) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", base::rm("__callr_dump__", envir = .GlobalEnv) msg) } if (callr_data$has_otel) { e <- err$process_call(e) callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") e2 <- err$new_error("error in callr subprocess") } class <- base::class else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { class(e2) <- base::c("callr_remote_error", class(e2)) base::invokeRestart("muffleMessage") e2 <- err$add_trace_back(e2) } cut <- base::which(e2$trace$scope == "global")[1] }) if (!base::is.na(cut)) {}) e2$trace <- e2$trace[-(1:cut), ]
> test_loo_predictive_metric.R: }45: if (callr_data$has_otel) {doTryCatch(return(expr), name, parentenv, handler) callr_data$otel_span$record_exception(e2)
> test_loo_predictive_metric.R: }46: base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead67d34550", tryCatchOne(expr, names, parentenv, handlers[[1L]]) ".error"))
> test_loo_predictive_metric.R: }47: }, callr_message = function(e) {tryCatchList(expr, names[-nh], parentenv, handlers[-nh]) base::try({
> test_loo_predictive_metric.R: callr_data <- base::as.environment("tools:callr")$`__callr_data__`48: pxlib <- callr_data$pxlibdoTryCatch(return(expr), name, parentenv, handler) if (base::is.null(e$code)) {
> test_loo_predictive_metric.R: e$code <- "301"49: }tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, names[nh], parentenv, handlers[[nh]]) NULL)))
> test_loo_predictive_metric.R: data <- base::paste0(e$code, " ", base::nchar(msg), "\n", 50: msg)tryCatchList(expr, classes, parentenv, handlers) if (callr_data$has_otel) {
> test_loo_predictive_metric.R: callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) {51: base::invokeRestart("cli_message_handled")base::tryCatch(base::withCallingHandlers({ } { else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { NULL base::invokeRestart("muffleMessage") NULL } } })})
> test_loo_predictive_metric.R: 45: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 46:
> test_loo_predictive_metric.R: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpFIq2sk/callr-fun-13ead787d96c"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead67d34550", compress = FALSE) base::flush(base::stdout())tryCatchOne(expr, names, parentenv, handlers[[1L]]) base::flush(base::stderr()) {
> test_loo_predictive_metric.R: NULL47: NULLtryCatchList(expr, names[-nh], parentenv, handlers[-nh]) }
> test_loo_predictive_metric.R: base::invisible()48: }, error = function(e) {doTryCatch(return(expr), name, parentenv, handler) {
> test_loo_predictive_metric.R: callr_data <- base::as.environment("tools:callr")$`__callr_data__`49: err <- callr_data$errtryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), if (FALSE) { names[nh], parentenv, handlers[[nh]]) base::assign(".Traceback", base::.traceback(4), envir = callr_data)
> test_loo_predictive_metric.R: utils::dump.frames("__callr_dump__")50: base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, tryCatchList(expr, classes, parentenv, handlers) envir = callr_data)
> test_loo_predictive_metric.R: base::rm("__callr_dump__", envir = .GlobalEnv)51: }base::tryCatch(base::withCallingHandlers({ e <- err$process_call(e) { e2 <- err$new_error("error in callr subprocess") NULL class <- base::class NULL class(e2) <- base::c("callr_remote_error", class(e2)) } e2 <- err$add_trace_back(e2) base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpFIq2sk/callr-fun-13ead787d96c"), cut <- base::which(e2$trace$scope == "global")[1] base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, if (!base::is.na(cut)) { quote = TRUE), file = "/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead67d34550", e2$trace <- e2$trace[-(1:cut), ] compress = FALSE) } base::flush(base::stdout()) if (callr_data$has_otel) { base::flush(base::stderr()) callr_data$otel_span$record_exception(e2) { NULL NULL } base::invisible() } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead67d34550", ".error")) }}, interrupt = function(e) {}, error = function(e) { { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err err <- callr_data$err if (FALSE) { if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) base::rm("__callr_dump__", envir = .GlobalEnv) } } e <- err$process_call(e) e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") e2 <- err$new_error("error in callr subprocess") class <- base::class class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] e2$trace <- e2$trace[-(1:cut), ] } } if (callr_data$has_otel) { if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead67d34550", ".error")) } } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead67d34550", }, callr_message = function(e) { ".error")) base::try({ } callr_data <- base::as.environment("tools:callr")$`__callr_data__`}, interrupt = function(e) { pxlib <- callr_data$pxlib { if (base::is.null(e$code)) { callr_data <- base::as.environment("tools:callr")$`__callr_data__` e$code <- "301" err <- callr_data$err } if (FALSE) { msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, base::assign(".Traceback", base::.traceback(4), envir = callr_data) NULL))) utils::dump.frames("__callr_dump__") data <- base::paste0(e$code, " ", base::nchar(msg), "\n", base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, msg) envir = callr_data) if (callr_data$has_otel) { base::rm("__callr_dump__", envir = .GlobalEnv) callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { } base::invokeRestart("cli_message_handled") e <- err$process_call(e) } e2 <- err$new_error("error in callr subprocess") else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { class <- base::class base::invokeRestart("muffleMessage") class(e2) <- base::c("callr_remote_error", class(e2)) } e2 <- err$add_trace_back(e2) }) cut <- base::which(e2$trace$scope == "global")[1]}), error = function(e) { if (!base::is.na(cut)) { { e2$trace <- e2$trace[-(1:cut), ] NULL } NULL if (callr_data$has_otel) { } callr_data$otel_span$record_exception(e2) if (FALSE) { } base::try(base::stop(e)) base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpFIq2sk/callr-rs-result-13ead67d34550", } ".error")) if (FALSE) { } base::q(save = "no", status = 1)}, callr_message = function(e) { } base::try({ base::invisible() callr_data <- base::as.environment("tools:callr")$`__callr_data__`}, interrupt = function(e) { pxlib <- callr_data$pxlib { if (base::is.null(e$code)) { NULL e$code <- "301" NULL } } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, if (FALSE) { NULL))) base::q(save = "no", status = 1) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", } msg) base::invisible() if (callr_data$has_otel) {}) callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled")
> test_loo_predictive_metric.R: An irrecoverable exception occurred. R is aborting now ...
> test_loo_predictive_metric.R: } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })}), error = function(e) { { NULL NULL } if (FALSE) { base::try(base::stop(e)) } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()}, interrupt = function(e) { { NULL NULL } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()})
> test_loo_predictive_metric.R: An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test_loo_predictive_metric-4.R
[ FAIL 2 | WARN 1 | SKIP 34 | PASS 847 ]
══ Skipped tests (34) ══════════════════════════════════════════════════════════
• On CRAN (32): 'test_loo_subsampling_cases.R:4:3',
'test_loo_subsampling_cases.R:256:3', 'test_E_loo.R:134:1',
'test_E_loo.R:142:1', 'test_compare.R:91:1', 'test_compare.R:122:1',
'test_compare.R:160:1', 'test_crps.R:27:1',
'test_deprecated_extractors.R:8:1', 'test_deprecated_extractors.R:106:1',
'test_gpdfit.R:1:1', 'test_kfold_helpers.R:139:1',
'test_loo_and_waic.R:23:1', 'test_loo_moment_matching.R:157:1',
'test_loo_moment_matching.R:247:1', 'test_loo_moment_matching.R:365:1',
'test_model_weighting.R:69:1', 'test_print_plot.R:41:1',
'test_print_plot.R:45:1', 'test_print_plot.R:151:1',
'test_print_plot.R:169:1', 'test_print_plot.R:175:1',
'test_print_plot.R:181:1', 'test_psis.R:13:1', 'test_psis.R:39:1',
'test_psislw.R:15:1', 'test_relative_eff.R:7:1', 'test_relative_eff.R:43:3',
'test_loo_subsampling.R:896:3', 'test_loo_subsampling.R:1077:3',
'test_tisis.R:76:1', 'test_tisis.R:213:1'
• Sys.info()[["sysname"]] == "Darwin" && R.version$arch == "aarch64" is TRUE
(2): 'test_loo_moment_matching.R:468:3', 'test_psis.R:157:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_loo_and_waic.R:30:3'): loo with cores=1 and cores=2 gives same results ──
Error in `vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)`: values must be length 1000,
but FUN(X[[1]]) result is length 0
Backtrace:
▆
1. ├─base::suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2)) at test_loo_and_waic.R:30:3
2. │ └─base::withCallingHandlers(...)
3. ├─loo::loo(LLarr, r_eff = r_eff_arr, cores = 2)
4. └─loo::loo.array(LLarr, r_eff = r_eff_arr, cores = 2)
5. └─loo:::importance_sampling.array(...)
6. └─loo:::do_importance_sampling(...)
7. └─loo:::psis_apply(lw_list, "log_weights", fun_val = numeric(S))
8. └─base::vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)
── Error ('test_loo_predictive_metric.R:4:1'): (code run outside of `test_that()`) ──
Error in `vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)`: values must be length 1000,
but FUN(X[[1]]) result is length 0
Backtrace:
▆
1. ├─loo::psis(-LL, r_eff = r_eff, cores = 2) at test_loo_predictive_metric.R:4:1
2. └─loo:::psis.matrix(-LL, r_eff = r_eff, cores = 2)
3. └─loo:::importance_sampling.matrix(...)
4. └─loo:::do_importance_sampling(...)
5. └─loo:::psis_apply(lw_list, "log_weights", fun_val = numeric(S))
6. └─base::vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)
[ FAIL 2 | WARN 1 | SKIP 34 | PASS 847 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-arm64
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