Last updated on 2024-04-30 09:54:06 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.1 | 16.38 | 153.17 | 169.55 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.0.1 | 12.81 | 112.94 | 125.75 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.0.1 | 215.29 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0.1 | 159.69 | OK | |||
| r-devel-windows-x86_64 | 1.0.1 | 14.00 | 155.00 | 169.00 | ERROR | |
| r-patched-linux-x86_64 | 1.0.1 | 16.43 | 144.67 | 161.10 | ERROR | |
| r-release-linux-x86_64 | 1.0.1 | 11.37 | 145.02 | 156.39 | OK | |
| r-release-macos-arm64 | 1.0.1 | 106.00 | OK | |||
| r-release-macos-x86_64 | 1.0.1 | 233.00 | OK | |||
| r-release-windows-x86_64 | 1.0.1 | 16.00 | 159.00 | 175.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.1 | 110.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.0.1 | 187.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.0.1 | 20.00 | 191.00 | 211.00 | OK |
Version: 1.0.1
Check: examples
Result: ERROR
Running examples in 'refseqR-Ex.R' failed
The error most likely occurred in:
> ### Name: refseq_geneSymbol
> ### Title: Get the gene symbol
> ### Aliases: refseq_geneSymbol
>
> ### ** Examples
>
> # Get the gene symbol from a set of XM accessions
> xm = c("XM_004487701", "XM_004488493")
> sapply(xm, function(x) refseq_geneSymbol (x, db = "nuccore"), USE.NAMES = FALSE)
[1] "LOC101512347" "LOC101506901"
>
> # Get the gene symbol from a set of XP accessions
> xp = c("XP_004487758")
> sapply(xp, function(x) refseq_geneSymbol (x, db = "protein"), USE.NAMES = FALSE)
Warning in check_xml_errors(x) : BLOB ID IS NOT IMPLEMENTED
Warning in check_xml_errors(x) : NCBI C++ Exception:
Error: UNK_MODULE(CException::eInvalid) "UNK_FILE", line 18446744073709551615: UNK_FUNC ---
Error: Must specify either (not both) 'id' or 'web_history' arguments
Execution halted
Flavor: r-devel-windows-x86_64
Version: 1.0.1
Check: examples
Result: ERROR
Running examples in ‘refseqR-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: refseq_XPlength
> ### Title: Get the protein length from an XP accession
> ### Aliases: refseq_XPlength
>
> ### ** Examples
>
> # Get the XM ids from a set of XP accessions
> xp = c("XP_004487758", "XP_004488550")
> sapply(xp, function(x) refseq_XPlength(x), USE.NAMES = FALSE)
Warning: Esummary includes error message: Invalid uid XP_004488550 at position= 0
Error: No esummary records found in file
Execution halted
Flavor: r-patched-linux-x86_64
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They may not be fully stable and should be used with caution. We make no claims about them.