Last updated on 2026-01-17 03:52:40 CET.
| Package | ERROR | OK |
|---|---|---|
| mapi | 2 | 11 |
Current CRAN status: ERROR: 2, OK: 11
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [100s/231s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.604, system: 0.041, elapsed: 2.262 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.563, system: 0.071, elapsed: 11.292 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.225, system: 0.019, elapsed: 0.452 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.734, system: 0.671, elapsed: 26.678 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.002, elapsed: 0.209 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.873, system: 0.829, elapsed: 41.954 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.542, system: 0.029, elapsed: 3.226 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.589, system: 0.070, elapsed: 22.560 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.015, elapsed: 1.157 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.276, system: 0.722, elapsed: 36.570 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.002, elapsed: 0.179 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.434, system: 0.862, elapsed: 64.739 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.488, system: 0.024, elapsed: 1.524 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.681, system: 0.103, elapsed: 11.964 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.308, system: 0.013, elapsed: 0.351 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.814, system: 0.817, elapsed: 8.496 seconds]
Computing values for grid cells...
... done. [user: 0.188, system: 0.012, elapsed: 0.265 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.267, system: 0.343, elapsed: 1.174 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.521, system: 1.364, elapsed: 24.531 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.595, system: 0.045, elapsed: 2.290 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.631, system: 0.087, elapsed: 11.134 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.215, system: 0.015, elapsed: 0.291 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.749, system: 0.688, elapsed: 44.425 seconds]
Computing values for grid cells...
... done. [user: 0.186, system: 0.007, elapsed: 0.255 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.401, system: 0.617, elapsed: 33.450 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.489, system: 1.490, elapsed: 92.834 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/225s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.593, system: 0.039, elapsed: 4.651 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.533, system: 0.052, elapsed: 25.097 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.016, elapsed: 0.526 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.295, system: 0.436, elapsed: 12.447 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.003, elapsed: 0.451 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.369, system: 0.571, elapsed: 44.802 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.617, system: 0.031, elapsed: 4.244 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.569, system: 0.090, elapsed: 25.479 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.015, elapsed: 0.597 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.297, system: 0.419, elapsed: 12.670 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.004, elapsed: 0.424 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.421, system: 0.585, elapsed: 45.062 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.577, system: 0.036, elapsed: 4.380 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.637, system: 0.078, elapsed: 25.552 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.012, elapsed: 0.553 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.376, system: 0.389, elapsed: 13.074 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.008, elapsed: 0.479 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.202, system: 0.308, elapsed: 2.141 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.830, system: 0.859, elapsed: 48.008 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.645, system: 0.036, elapsed: 4.400 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.675, system: 0.077, elapsed: 25.768 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.013, elapsed: 0.527 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.262, system: 0.391, elapsed: 11.903 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.429 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.608, system: 0.462, elapsed: 27.900 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.231, system: 1.003, elapsed: 72.733 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.