Suggests: dittoSeq, BiocStyle, vcr, webmockr, testthat, knitr,
rmarkdown

Imports: ape, coxme, doParallel, dplyr, foreach, iterators, lme4,
multcomp, parallel, plyr, qqman, survival, seqinr

Depends: R (>= 3.4.0)
Suggests: covr, knitr, rlang, rmarkdown, testthat

Imports: tcltk, grDevices, utils, Biobase
Suggests: tkrplot, gWidgets2, Rgraphviz, ssize, Biostrings,
BiocManager, RSQLite, GEOquery, GEOmetadb, RBGL, WGCNA,
KEGGREST, KEGGgraph, pdInfoBuilder, lumi, oligo, graph, affy,
genefilter, beadarray, GOstats, GO.db, Category, annotate,
impute, limma, graphics, methods, stats

Depends: R (>= 3.5.0)
Imports: data.table, tidyr, ggplot2, lpSolve, quadprog

Depends: R (>= 3.3)
Imports: commonmark, gmailr, rstudioapi, googledrive, rmarkdown, glue,
magrittr, purrr, utils, fs, lifecycle, shiny, miniUI
Suggests: spelling, withr, covr, knitr, testthat (>= 2.1.0), here,
mockery, readr

Imports: rJava, stringr, R.utils, assertthat

Depends: R (>= 2.10)
Imports: config, dplyr, DT, glue, golem, grDevices, htmltools,
htmlwidgets, magrittr, openxlsx, pkgload, processx, rlang, sf,
shiny, spData, tidyr, tmap, tmaptools, utils
Suggests: BiocCheck, covr, knitr, rmarkdown, testthat

Imports: MASS, miscTools, robustbase, rrcov, pcaPP, mclust, ggplot2,
GGally, sn (>= 1.3.0), withr
LinkingTo: Rcpp, RcppArmadillo (>= 0.9.500.2.0)

Suggests: dplyr, ggplot2, knitr, readr, rmarkdown

Depends: R (>= 3.6.0)
Imports: ggplot2, Matrix, methods, shiny, shinyjs, shinyBS, visNetwork,
rlang, MASS
Suggests: rstan (>= 2.21.2), INLA (>= 20.03.17), knitr, rmarkdown

Imports: terra, cluster, grDevices, prismatic

Imports: cli, nomnoml, R6, utils, roxygen2
Suggests: knitr, covr, testthat (>= 3.0.0), withr, rmarkdown, webshot,
visNetwork,

Suggests: curl, knitr, rmarkdown, testthat

Suggests: knitr, rmarkdown, testthat, ggraph, dirmult, Rmpfr

Depends: ggplot2
Imports: xml2, gridExtra, httr, dplyr, tidyr, methods, stats, utils,
rlang, sf, lifecycle, terra, tidyterra, ows4R, future.apply,
lubridate, jsonlite, stringr
Suggests: testthat, knitr, rmarkdown, palettetown, magrittr, tibble,
rdhs (>= 0.8.0)