We describe fifteen different splice site sequence encoding schemes that have been used in earlier studies for mapping of splice site sequences into numeric feature vectors. These encoding schemes will also be helpful for transforming other nucleotide sequences into numeric forms, provided they are of equal length. These encoding schemes will help the computational biologist working in the field of classification (binary or multiclass) or prediction involving nucleic acid sequences of equal length.

Implements a segmentation algorithm for multiple change-point detection in univariate time series using the Ensemble Binary Segmentation of Korkas (2020) <arXiv:2003.03649>.

Interconverts between ordered lists and compact string notation.  
 Useful for capturing code lists, and pair-wise codes and decodes, for text storage.
 Analogous to factor levels and labels. Generics encode() and decode()
 perform interconversion, while codes() and decodes() extract components of an encoding.
 The function encoded() checks whether something is interpretable as an encoding.
 If a vector has an encoded 'guide' attribute, as_factor() uses it to coerce to factor.

The encompassing test is developed based on multi-step-ahead predictions of two nested models as in Pitarakis, J. (2023) <doi:10.48550/arXiv.2312.16099>. The statistics are standardised to a normal distribution, and the null hypothesis is that the larger model contains no additional useful information. P-values will be provided in the output.

Create encrypted html files that are fully self contained and do
  not require any additional software. Using the package you can encrypt
  arbitrary html files and also directly create encrypted 'rmarkdown' html reports.

It is important to ensure that sensitive data is protected. 
    This straightforward package is aimed at the end-user. 
    Strong RSA encryption using a public/private key pair is used to encrypt data frame or tibble columns.
    A public key can be shared to allow others to encrypt data to be sent to you. 
    This is particularly aimed a healthcare settings so patient data can be pseudonymised.