Imports: data.table, flexdashboard, ggplot2, methods, nloptr,
RColorBrewer, rlang, rmarkdown

Depends: R (>= 3.0)
Imports: foreach, parallel, doParallel, graphics, grDevices, stats,
survival

Suggests: bookdown, DiagrammeR, dplyr (>= 1.0.0), knitr, magrittr,
readr, rmarkdown, TITAN2, testthat (>= 3.0.0), tidyr

Depends: R (>= 4.0.0)
Imports: bio3d (>= 2.3-4), Biostrings, curl, graphics, httr (>= 1.3.1),
igraph, jsonlite, muscle, RCurl, seqinr, stats, utils, xml2
Suggests: KEGGREST, knitr, markdown, testthat

Imports: graphics, GLMMadaptive, lme4, matrixcalc, moments, mvtnorm,
numDeriv, tweeDEseq

Depends: R (>= 3.0.0)
Imports: partitions, sp, raster, igraph, RANN, spatstat.geom,
spatstat.utils, sf, stats, methods
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)

Imports: pryr (>= 0.1.4), stringr (>= 1.4.0), utils
Suggests: covr, knitr, markdown, ProjectTemplate (>= 0.9.3), rmarkdown,
testthat

Imports: extraDistr, SuppDists, actuar, numDeriv

Imports: httr, glue, digest, jsonlite, purrr, tibble, assertthat
Suggests: testthat (>= 2.1.0), dplyr, lubridate

Imports: RcppDE, graphics, grDevices, stats

Imports: data.table, ggplot2 (>= 2.2), ggdendro, grid, gridExtra,
grDevices, gtable, htmlTable, knitr (>= 1.10), magrittr,
methods, plyr, R6, R6P, RColorBrewer, reshape2, rmarkdown,
rmzqc (>= 0.5.0), seqinr, stats, utils, UpSetR, xml2, yaml

Imports: dplyr, httr, RJSONIO, RCurl, tibble, tidyr, utils, magrittr,
stringr, magick, png, rsvg, xml2, XML

Depends: R (>= 4.1.0), emmeans, ggformula, gtsummary, huxtable,
magrittr, stats
Imports: car, dplyr, Epi, epiR, epitools, ggplot2, lmtest, moonBook,
sandwich, sjlabelled, sjmisc, survival, tibble, tidyselect
Suggests: broom, effectsize, ggeffects, ggfortify, ggsci, Hmisc, ISwR,
jtools, knitr, latex2exp, lme4, MASS, nlme, nnet, parameters,
performance, report, rmarkdown, rms, rstatix, see, sjPlot,
tidyverse

Depends: R (>= 2.10)
Suggests: broom, conflicted, DiagrammeR, dplyr, forcats, ggplot2,
ggthemes, gt, haven, infer, janitor, knitr, kableExtra,
magrittr, pkgdown, plyr, psych, purrr, rlang, rmarkdown,
roxygen2, rUM, scales, stringr, table1, tibble, tidyr,
tidyverse, testthat (>= 3.0.0), vcdExtra, xfun