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Provides allele binning functionality for SSR/microsatellite markers using least-squares minimization (Idury & Cardon (1997) <doi:10.1101/gr.7.11.1104>). Includes a 'Shiny' application for interactive use, summary statistics, and visualization.
| Version: | 1.0.0 |
| Imports: | shiny, readxl, stats, utils, openxlsx |
| Suggests: | testthat (≥ 3.0.0), roxygen2 |
| Published: | 2026-09-10 |
| DOI: | 10.32614/CRAN.package.AlleloBin |
| Author: | VP Prasanth [aut, cre], Subhash Chandra [aut], DA Hoisington [aut], B Jayashree [aut] |
| Maintainer: | VP Prasanth <prasanth.stat at gmail.com> |
| BugReports: | https://github.com/vpprasanth/AlleloBin/issues |
| License: | GPL-3 |
| URL: | https://github.com/vpprasanth/AlleloBin |
| NeedsCompilation: | no |
| Materials: | README, NEWS |
| CRAN checks: | AlleloBin results |
| Reference manual: | AlleloBin.html , AlleloBin.pdf |
| Package source: | AlleloBin_1.0.0.tar.gz |
| Windows binaries: | r-devel: AlleloBin_1.0.0.zip, r-release: not available, r-oldrel: AlleloBin_1.0.0.zip |
| macOS binaries: | r-release (arm64): not available, r-oldrel (arm64): AlleloBin_1.0.0.tgz, r-release (x86_64): AlleloBin_1.0.0.tgz, r-oldrel (x86_64): AlleloBin_1.0.0.tgz |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.