The hardware and bandwidth for this mirror is donated by METANET, the Webhosting and Full Service-Cloud Provider.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]metanet.ch.

MAGNAMWAR: A Pipeline for Meta-Genome Wide Association

Correlates variation within the meta-genome to target species phenotype variations in meta-genome with association studies. Follows the pipeline described in Chaston, J.M. et al. (2014) <doi:10.1128/mBio.01631-14>.

Version: 2.0.4
Depends: R (≥ 3.0)
Imports: ape, coxme, doParallel, dplyr, foreach, iterators, lme4, multcomp, parallel, plyr, qqman, survival, seqinr
Suggests: knitr, rmarkdown
Published: 2018-07-12
DOI: 10.32614/CRAN.package.MAGNAMWAR
Author: Corinne Sexton [aut], John Chaston [aut, cre], Hayden Smith [ctb]
Maintainer: John Chaston <john_chaston at byu.edu>
License: MIT + file LICENSE
NeedsCompilation: no
Materials: README NEWS
CRAN checks: MAGNAMWAR results

Documentation:

Reference manual: MAGNAMWAR.pdf
Vignettes: Using MAGNAMWAR: a case study with *Drosophila melanogaster*

Downloads:

Package source: MAGNAMWAR_2.0.4.tar.gz
Windows binaries: r-devel: MAGNAMWAR_2.0.4.zip, r-release: MAGNAMWAR_2.0.4.zip, r-oldrel: MAGNAMWAR_2.0.4.zip
macOS binaries: r-release (arm64): MAGNAMWAR_2.0.4.tgz, r-oldrel (arm64): MAGNAMWAR_2.0.4.tgz, r-release (x86_64): MAGNAMWAR_2.0.4.tgz, r-oldrel (x86_64): MAGNAMWAR_2.0.4.tgz
Old sources: MAGNAMWAR archive

Linking:

Please use the canonical form https://CRAN.R-project.org/package=MAGNAMWAR to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.