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Performs Penalized Multivariate Analysis: a penalized matrix decomposition, sparse principal components analysis, and sparse canonical correlation analysis, described in Witten, Tibshirani and Hastie (2009) <doi:10.1093/biostatistics/kxp008> and Witten and Tibshirani (2009) Extensions of sparse canonical correlation analysis, with applications to genomic data <doi:10.2202/1544-6115.1470>.
| Version: | 1.2-3 |
| Depends: | R (≥ 2.10) |
| Imports: | utils |
| Published: | 2024-02-06 |
| Author: | Daniela Witten [aut], Rob Tibshirani [aut], Sam Gross [aut], Balasubramanian Narasimhan [cre, aut] |
| Maintainer: | Balasubramanian Narasimhan <naras at stanford.edu> |
| BugReports: | https://github.com/bnaras/PMA/issues |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| URL: | https://github.com/bnaras/PMA |
| NeedsCompilation: | yes |
| Materials: | README NEWS |
| In views: | Omics |
| CRAN checks: | PMA results |
| Reference manual: | PMA.pdf |
| Package source: | PMA_1.2-3.tar.gz |
| Windows binaries: | r-devel: PMA_1.2-3.zip, r-release: PMA_1.2-3.zip, r-oldrel: PMA_1.2-3.zip |
| macOS binaries: | r-release (arm64): PMA_1.2-3.tgz, r-oldrel (arm64): PMA_1.2-3.tgz, r-release (x86_64): PMA_1.2-3.tgz, r-oldrel (x86_64): PMA_1.2-3.tgz |
| Old sources: | PMA archive |
| Reverse depends: | CVR, EESPCA, LPGraph |
| Reverse imports: | HMC, miRSM, omicRexposome, prinvars, RFCCA |
| Reverse suggests: | conos, epca |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.