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A simple and flexible way to generate Circos 2D track plot images for genomic data visualization is implemented in this package. The types of plots include: heatmap, histogram, lines, scatterplot, tiles and plot items for further decorations include connector, link (lines and ribbons), and text (gene) label. All functions require only R graphics package that comes with R base installation.
| Version: | 1.2.2 |
| Depends: | R (≥ 2.10) |
| Published: | 2021-12-19 |
| Author: | Hongen Zhang |
| Maintainer: | Hongen Zhang <hzhang.henry at gmail.com> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
| URL: | https://github.com/hzhanghenry/RCircos |
| NeedsCompilation: | no |
| Citation: | RCircos citation info |
| In views: | Omics |
| CRAN checks: | RCircos results |
| Reference manual: | RCircos.pdf |
| Vignettes: |
Using_RCircos |
| Package source: | RCircos_1.2.2.tar.gz |
| Windows binaries: | r-devel: RCircos_1.2.2.zip, r-release: RCircos_1.2.2.zip, r-oldrel: RCircos_1.2.2.zip |
| macOS binaries: | r-release (arm64): RCircos_1.2.2.tgz, r-oldrel (arm64): RCircos_1.2.2.tgz, r-release (x86_64): RCircos_1.2.2.tgz, r-oldrel (x86_64): RCircos_1.2.2.tgz |
| Old sources: | RCircos archive |
| Reverse imports: | Basic4Cseq, chimeraviz, PACVr |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.