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If you use this R package in your research paper, please cite as Heidrich V. et al. (2021). When referencing the SRS algorithm itself, please cite Beule L. & Karlovsky P. (2020).

Beule L, Karlovsky P (2020). “Improved normalization of species count data in ecology by scaling with ranked subsampling (SRS): application to microbial communities.” PeerJ, 8, e9593. https://doi.org/10.7717/peerj.9593.

Heidrich V, Karlovsky P, Beule L (2021). “‘SRS’ R Package and ‘q2-srs’ QIIME 2 Plugin: Normalization of Microbiome Data Using Scaling with Ranked Subsampling (SRS).” Applied Sciences, 11(23)(11473). https://doi.org/10.3390/app112311473.

Corresponding BibTeX entries:

  @Article{,
    title = {Improved normalization of species count data in ecology by
      scaling with ranked subsampling (SRS): application to microbial
      communities},
    author = {L. Beule and P. Karlovsky},
    journal = {PeerJ},
    volume = {8},
    pages = {e9593},
    year = {2020},
    url = {https://doi.org/10.7717/peerj.9593},
  }
  @Article{,
    title = {‘SRS’ R Package and ‘q2-srs’ QIIME 2 Plugin: Normalization
      of Microbiome Data Using Scaling with Ranked Subsampling (SRS)},
    author = {V. Heidrich and P. Karlovsky and L. Beule},
    journal = {Applied Sciences},
    volume = {11(23)},
    number = {11473},
    year = {2021},
    url = {https://doi.org/10.3390/app112311473},
  }

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.