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TRAMPR: 'TRFLP' Analysis and Matching Package for R

Matching terminal restriction fragment length polymorphism ('TRFLP') profiles between unknown samples and a database of known samples. 'TRAMPR' facilitates analysis of many unknown profiles at once, and provides tools for working directly with electrophoresis output through to generating summaries suitable for community analyses with R's rich set of statistical functions. 'TRAMPR' also resolves the issues of multiple 'TRFLP' profiles within a species, and shared 'TRFLP' profiles across species.

Version: 1.0-10
Depends: R (≥ 2.4)
Published: 2022-02-07
DOI: 10.32614/CRAN.package.TRAMPR
Author: Rich FitzJohn [aut, cre], Ian Dickie [aut]
Maintainer: Rich FitzJohn <rich.fitzjohn at gmail.com>
License: GPL-2
URL: https://github.com/richfitz/TRAMPR
NeedsCompilation: no
Citation: TRAMPR citation info
Materials: README ChangeLog
CRAN checks: TRAMPR results

Documentation:

Reference manual: TRAMPR.pdf
Vignettes: Introduction to TRAMPR

Downloads:

Package source: TRAMPR_1.0-10.tar.gz
Windows binaries: r-devel: TRAMPR_1.0-10.zip, r-release: TRAMPR_1.0-10.zip, r-oldrel: TRAMPR_1.0-10.zip
macOS binaries: r-release (arm64): TRAMPR_1.0-10.tgz, r-oldrel (arm64): TRAMPR_1.0-10.tgz, r-release (x86_64): TRAMPR_1.0-10.tgz, r-oldrel (x86_64): TRAMPR_1.0-10.tgz
Old sources: TRAMPR archive

Reverse dependencies:

Reverse suggests: Ecfun

Linking:

Please use the canonical form https://CRAN.R-project.org/package=TRAMPR to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.