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Version 1.3.0: September 29, 2023

Backwards Incompatible Changes:

General:

Diversity:

Gene:

Version 1.2.1: September 19, 2022

General:

Version 1.2.0: October 31, 2021

General:

Gene Usage:

Lineage:

Version 1.1.0: February 6, 2021

General:

Amino Acid Analysis:

Diversity: + Added a parameter to countClones (remove_na) that will remove all rows with NA values in the clone column if TRUE (default) and issue a warning with how many were removed. If FALSE, those rows will be kept instead.

Gene Usage:

Lineage:

Version 1.0.2: July 17, 2020

Diversity:

Gene Usage:

Version 1.0.1: May 8, 2020

Backwards Incompatible Changes:

General:

Diversity:

Lineage:

Version 0.3.0: July 17, 2019

Deprecated:

General:

Lineage:

Diversity:

Gene Usage:

Version 0.2.11: September 12, 2018

General:

Diversity:

Gene Usage:

Toplogy Analysis:

Version 0.2.10: March 30, 2018

General:

Version 0.2.9: March 21, 2018

General:

Diversity:

Gene Usage:

Lineage:

Version 0.2.8: September 21, 2017

General:

Lineage:

Version 0.2.7: June 12, 2017

General:

Gene Usage:

Version 0.2.6: March 21, 2017

General:

Version 0.2.5: August 5, 2016

General:

Version 0.2.4: July 20, 2016

General:

Amino Acid Analysis:

Diversity Analysis:

Gene Usage:

Topology Analysis:

Version 0.2.3: February 22, 2016

General:

Version 0.2.2: January 29, 2016

General:

Amino Acid Analysis:

Diversity:

Lineage:

Version 0.2.1: December 18, 2015

General:

Amino Acid Analysis:

Annotation:

Diversity:

Version 0.2.0: June 15, 2015

Initial public release.

General:

Version 0.2.0.beta-2015-05-30: May 30, 2015

Lineage:

Version 0.2.0.beta-2015-05-26: May 26, 2015

Lineage:

Version 0.2.0.beta-2015-05-05: May 05, 2015

Prerelease for review.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.