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antedep: Antedependence Models for Longitudinal Data

Fitting, simulation, and inference for antedependence models for longitudinal data, as described in Zimmerman and Nunez-Anton (2009, ISBN:9781420011074). Supports integer-valued antedependence (INAD) models for count data with thinning operators (binomial, Poisson, negative binomial) and flexible innovation distributions (Poisson, Bell, negative binomial), categorical antedependence models for discrete-state longitudinal outcomes, and Gaussian antedependence (AD) models for continuous data. Implements maximum likelihood estimation via time-separable optimization and block coordinate descent, with confidence intervals based on Louis' identity and profile likelihood.

Version: 0.1.0
Depends: R (≥ 3.5)
Imports: nloptr (≥ 1.2.0), stats, ggplot2, MASS
Suggests: knitr, rmarkdown, testthat (≥ 3.0.0)
Published: 2026-04-24
DOI: 10.32614/CRAN.package.antedep
Author: Chenyang Li [aut, cre], Dale Zimmerman [aut, ctb]
Maintainer: Chenyang Li <chenyang-li at uiowa.edu>
BugReports: https://github.com/TanchyKing/antedep/issues
License: MIT + file LICENSE
URL: https://tanchyking.github.io/antedep/, https://github.com/TanchyKing/antedep
NeedsCompilation: no
Language: en-US
Materials: README, NEWS
CRAN checks: antedep results

Documentation:

Reference manual: antedep.html , antedep.pdf
Vignettes: Introduction to antedep (source, R code)

Downloads:

Package source: antedep_0.1.0.tar.gz
Windows binaries: r-release: antedep_0.1.0.zip, r-oldrel: antedep_0.1.0.zip
macOS binaries: r-release (arm64): antedep_0.1.0.tgz, r-oldrel (arm64): antedep_0.1.0.tgz, r-release (x86_64): antedep_0.1.0.tgz, r-oldrel (x86_64): antedep_0.1.0.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=antedep to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.