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bidser: Work with 'BIDS' (Brain Imaging Data Structure) Projects

Tools for working with 'BIDS' (Brain Imaging Data Structure) formatted neuroimaging datasets. The package provides functionality for reading and querying 'BIDS'-compliant projects, creating mock 'BIDS' datasets for testing, and extracting preprocessed data from 'fMRIPrep' derivatives. It supports searching and filtering 'BIDS' files by various entities such as subject, session, task, and run to streamline neuroimaging data workflows. See Gorgolewski et al. (2016) <doi:10.1038/sdata.2016.44> for the 'BIDS' specification.

Version: 0.2.0
Imports: stringr, data.tree, neuroim2, tidyselect, dplyr, assertthat, crayon, fs, jsonlite, magrittr, purrr, readr, rlang, stringdist, tibble, tidyr, httr, rio
Suggests: ggplot2, plotly, patchwork, viridis, scales, knitr, rmarkdown, testthat, covr, lintr, gluedown, RNifti, future, future.apply
Published: 2026-02-19
DOI: 10.32614/CRAN.package.bidser
Author: Bradley Buchsbaum ORCID iD [aut, cre]
Maintainer: Bradley Buchsbaum <brad.buchsbaum at gmail.com>
BugReports: https://github.com/bbuchsbaum/bidser/issues
License: MIT + file LICENSE
URL: https://github.com/bbuchsbaum/bidser, https://bbuchsbaum.github.io/bidser/
NeedsCompilation: no
Citation: bidser citation info
Materials: README, NEWS
CRAN checks: bidser results

Documentation:

Reference manual: bidser.html , bidser.pdf
Vignettes: Getting Started with bidser (source, R code)

Downloads:

Package source: bidser_0.2.0.tar.gz
Windows binaries: r-devel: not available, r-release: bidser_0.2.0.zip, r-oldrel: bidser_0.2.0.zip
macOS binaries: r-release (arm64): bidser_0.2.0.tgz, r-oldrel (arm64): bidser_0.2.0.tgz, r-release (x86_64): not available, r-oldrel (x86_64): not available

Linking:

Please use the canonical form https://CRAN.R-project.org/package=bidser to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.