The hardware and bandwidth for this mirror is donated by METANET, the Webhosting and Full Service-Cloud Provider.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]metanet.ch.

dynwrap: Representing and Inferring Single-Cell Trajectories

Provides functionality to infer trajectories from single-cell data, represent them into a common format, and adapt them. Other biological information can also be added, such as cellular grouping, RNA velocity and annotation. Saelens et al. (2019) <doi:10.1038/s41587-019-0071-9>.

Version: 1.2.4
Depends: R (≥ 3.0.0)
Imports: assertthat, babelwhale, crayon, dplyr, dynutils (≥ 1.0.3), dynparam, igraph, glue, magrittr, Matrix, methods, purrr, processx, readr, stringr, reshape2, tibble, tidyr, yaml
Suggests: covr, dyndimred, hdf5r, knitr, pkgload, ranger, rmarkdown, testthat
Published: 2023-07-19
DOI: 10.32614/CRAN.package.dynwrap
Author: Robrecht Cannoodt ORCID iD [aut, cre] (rcannood), Wouter Saelens ORCID iD [aut] (zouter)
Maintainer: Robrecht Cannoodt <rcannood at gmail.com>
BugReports: https://github.com/dynverse/dynwrap/issues
License: MIT + file LICENSE
URL: https://github.com/dynverse/dynwrap
NeedsCompilation: no
Citation: dynwrap citation info
Materials: README NEWS
In views: Omics
CRAN checks: dynwrap results

Documentation:

Reference manual: dynwrap.pdf
Vignettes: Creating a TI method: Container
Creating a TI method: Script
Creating a TI method: R
Creating a TI method: Wrapping trajectories

Downloads:

Package source: dynwrap_1.2.4.tar.gz
Windows binaries: r-devel: dynwrap_1.2.4.zip, r-release: dynwrap_1.2.4.zip, r-oldrel: dynwrap_1.2.4.zip
macOS binaries: r-release (arm64): dynwrap_1.2.4.tgz, r-oldrel (arm64): dynwrap_1.2.4.tgz, r-release (x86_64): dynwrap_1.2.4.tgz, r-oldrel (x86_64): dynwrap_1.2.4.tgz
Old sources: dynwrap archive

Reverse dependencies:

Reverse imports: SCORPIUS
Reverse suggests: dyngen

Linking:

Please use the canonical form https://CRAN.R-project.org/package=dynwrap to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.