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epiCo: Statistical and Viz Tools for Vector-Borne Diseases in Colombia

Provides statistical and visualization tools for the analysis of demographic indicators, and spatio-temporal behavior and characterization of outbreaks of vector-borne diseases (VBDs) in Colombia. It implements travel times estimated in Bravo-Vega C., Santos-Vega M., & Cordovez J.M. (2022), and the endemic channel method (Bortman, M. (1999) <https://iris.paho.org/handle/10665.2/8562>).

Version: 1.0.0
Depends: R (≥ 3.5.0)
Imports: dplyr, ggplot2, ggraph, igraph, incidence, leaflet, lubridate, magrittr, RColorBrewer, rlang, scales, spdep, stats, treemapify, utils
Suggests: checkmate, covr, knitr, rmarkdown, testthat (≥ 3.0.0)
Published: 2024-06-28
DOI: 10.32614/CRAN.package.epiCo
Author: Juan D. Umaña ORCID iD [aut, cre, cph], Juan Montenegro-Torres ORCID iD [aut], Julian Otero ORCID iD [aut], Hugo Gruson ORCID iD [ctb]
Maintainer: Juan D. Umaña <jd.umana10 at uniandes.edu.co>
BugReports: https://github.com/epiverse-trace/epiCo/issues
License: MIT + file LICENSE
URL: https://epiverse-trace.github.io/epiCo/, https://github.com/epiverse-trace/epiCo
NeedsCompilation: no
Materials: README NEWS
CRAN checks: epiCo results

Documentation:

Reference manual: epiCo.pdf
Vignettes: Analyzing demographic data with epiCo
Building an Endemic Channel with epiCo
Spatiotemporal analyses with epiCo

Downloads:

Package source: epiCo_1.0.0.tar.gz
Windows binaries: r-devel: not available, r-release: epiCo_1.0.0.zip, r-oldrel: epiCo_1.0.0.zip
macOS binaries: r-release (arm64): epiCo_1.0.0.tgz, r-oldrel (arm64): epiCo_1.0.0.tgz, r-release (x86_64): epiCo_1.0.0.tgz, r-oldrel (x86_64): epiCo_1.0.0.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=epiCo to link to this page.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.