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MSF Outbreak Dictionaries

The currently available MSF intersectional outbreak dictionaries (in ODK format): - Cholera/Acute watery diarrhea (“Cholera_intersectional”) - Meningitis (“Meningitis_intersectional) - Measles/Rubella (”Measles_intersectional”) - Acute Jaundice Syndrome (often suspected to be Hepatitis E) (“AJS_intersectional”)

The currently available MSF OCA outbreak dictionaries available (in DHIS2 format):

Acute Jaundice Syndrome (AJS)

Variables in the intersectional dictionary

The intersectional AJS dictionary contains definitions for 19 variables:

Option codes in the intersectional dictionary

The dictionaries are exported using option codes that can be translated to human-readable format. This table shows how they are translated.

Variables in the OCA dictionary

The OCA AJS dictionary contains definitions for 68 variables:

Option codes in the OCA dictionary

The dictionaries are exported using option codes that can be translated to human-readable format. This table shows how they are translated.

Cholera

Variables in the intersectional dictionary

The intersectional Cholera dictionary contains definitions for 20 variables:

Option codes in the intersectional dictionary

The dictionaries are exported using option codes that can be translated to human-readable format. This table shows how they are translated.

Variables in the OCA dictionary

The OCA Cholera dictionary contains definitions for 45 variables:

Option codes in the OCA dictionary

The dictionaries are exported using option codes that can be translated to human-readable format. This table shows how they are translated.

Measles

Variables in the intersectional dictionary

The Measles dictionary contains definitions for 17 variables:

Option codes in the intersectional dictionary

The dictionaries are exported using option codes that can be translated to human-readable format. This table shows how they are translated.

Variables in the OCA dictionary

The Measles dictionary contains definitions for 52 variables:

Option codes in the OCA dictionary

The dictionaries are exported using option codes that can be translated to human-readable format. This table shows how they are translated.

Meningitis

Variables in the intersectional dictionary

The Meningitis dictionary contains definitions for 26 variables:

Option codes in the intersectional dictionary

The dictionaries are exported using option codes that can be translated to human-readable format. This table shows how they are translated.

Variables in the OCA dictionary

The Meningitis dictionary contains definitions for 53 variables:

Option codes in the OCA dictionary

The dictionaries are exported using option codes that can be translated to human-readable format. This table shows how they are translated.

Diphtheria

Variables in the intersectional dictionary

The Diptheria dictionary contains definitions for 24 variables:

Option codes in the intersectional dictionary

The dictionaries are exported using option codes that can be translated to human-readable format. This table shows how they are translated.

Exploring the dictionaries

You can explore the excel-formatted dictionaries with browseURL(system.file("extdata", "MSF-outbreak-dict.xlsx", package = "epidict")), but treat it as read-only.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.