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mt 2.0-1.1:

• pca.outlier: add prefix to ellipse to avoid conflict with package car.

mt 2.0-1.2:

• corrgram.circle and corrgram.ellipse: move ‘scales’ into argument list.

mt 2.0-1.3:

• cl.auc: adjust auc: if (auc < 0.5) auc <- 1 - auc

mt 2.0-1.4: (14-05-2012)

• accest: Fix bugs and add more output.

mt 2.0-1.5: (16-05-2012)

• cl.roc: change output and fix bugs.

mt 2.0-1.6: (19-05-2012)

• cl.roc: add output of positive level.
• cl.perf: add confusion matrix, Kappa and positive outputs.

mt 2.0-1.7: (21-05-2012)

• plsc: minor changes for returned component pls.out so that R2 can be applied.
• plslda: minor changes for returned component pls.out so that R2 can be applied.

mt 2.0-1.8: (22-05-2012)

• classifier: bugs fix

mt 2.0-1.9: (22-05-2013)

• df.summ: add dots argument and modify an user-defined function.

mt 2.0-1.10: (09-01-2014)

• stats.vec and stats.mat: summarising two groups stats, such as p-values.
• fs.cl.2, perf and perf.aam: internal functions (21-01-2014).

mt 2.0-1.11: (22-01-2014)

• re-write shrink.list
• add proprec.auto as hidden function and tidy up

mt 2.0-1.12: (07-08-2014)

• fix bug in pval.reject: add na.rm = TRUE
• change in .grpplot: remove xlab and ylab inside.

mt 2.0-1.13: (10-06-2015)

• two functions mdsplot and mds_plot_wrap for MDS plotting.

mt 2.0-1.14: (16-07-2015)

• Re-write two functions for ellipse: panel.elli and panel.elli.1
• Provide panel.outl for labelling data points outside ellipse. They can be considered as outliers.

mt 2.0-1.15: (19-11-2015)

• .path.package is defunct so use path.package instead in csv2xls.
• Use pls:::coef.mvr replace coef.mvr since it hides in the new version of ‘pls’.

mt 2.0-1.16: (30-11-2015)

• Add log2 fold-change for stats.mat and stats.vec.
• Add adjusted p-values for stats.mat only.
• Provide documents for pca.outlier and pca.outlier.1. The former is lattice version and the later is the basic graphics version.

mt 2.0-1.17: (26-01-2016)

• Remove returned values of “direction” in stats.vec and stats.mat. So the results are numeric, not character.

mt 2.0-1.18: (06-11-2021)

• Replace melt and ddply with base R functions. So no need to load two packages reshape and plyr.
• Move out some un-documented functions.
• Change CHANGELOG as NEWS.md
• Move packages from Depends to Imports in DESCRIPTION
• Spell check on R scripts using RStudio

mt 2.0-1.19: (31-01-2022)

• no changes but test against new version of randomForest 4.7.1 as requested.

mt 2.0-1.20: (12-02-2024)

• No changes but new R version of R complains S3 method in RD file. So change the dot as underscore for: pca_plot_wrap, mds_plot_wrap, lda_plot_wrap, lda_plot_wrap_1 and pls_plot_wrap. (probably ‘.plot’ is the problem)

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.