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multiDimBio: Multivariate Analysis and Visualization for Biological Data

Code to support a systems biology research program from inception through publication. The methods focus on dimension reduction approaches to detect patterns in complex, multivariate experimental data and places an emphasis on informative visualizations. The goal for this project is to create a package that will evolve over time, thereby remaining relevant and reflective of current methods and techniques. As a result, we encourage suggested additions to the package, both methodological and graphical.

Version: 1.2.2
Imports: ggplot2 (≥ 3.2.0), lme4 (≥ 1.1-21), pcaMethods (≥ 1.76.0), misc3d (≥ 0.8-4), MASS (≥ 7.3-29), RColorBrewer (≥ 1.1-2), gridGraphics (≥ 0.1-5)
Published: 2020-04-09
DOI: 10.32614/CRAN.package.multiDimBio
Author: Samuel V. Scarpino
Maintainer: Samuel V. Scarpino <scarpino at utexas.edu>
License: GPL (≥ 3.0)
NeedsCompilation: no
Citation: multiDimBio citation info
CRAN checks: multiDimBio results

Documentation:

Reference manual: multiDimBio.pdf

Downloads:

Package source: multiDimBio_1.2.2.tar.gz
Windows binaries: r-devel: multiDimBio_1.2.2.zip, r-release: multiDimBio_1.2.2.zip, r-oldrel: multiDimBio_1.2.2.zip
macOS binaries: r-release (arm64): multiDimBio_1.2.2.tgz, r-oldrel (arm64): multiDimBio_1.2.2.tgz, r-release (x86_64): multiDimBio_1.2.2.tgz, r-oldrel (x86_64): multiDimBio_1.2.2.tgz
Old sources: multiDimBio archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.