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To cite outbreaker2:
Jombart T, Cori A, Didelot X, Cauchemez S, Fraser C, Ferguson N (2014). “Bayesian reconstruction of disease outbreaks by combining epidemiologic and genomic data.” PLoS Computational Biology, 10(11), e1003457. doi:10.1371/journal.pcbi.1003457.
Corresponding BibTeX entry:
@Article{,
title = {Bayesian reconstruction of disease outbreaks by combining
epidemiologic and genomic data},
journal = {PLoS Computational Biology},
year = {2014},
author = {Thibaut Jombart and Anne Cori and Xavier Didelot and
Simon Cauchemez and Christophe Fraser and Neil Ferguson},
volume = {10},
number = {11},
pages = {e1003457},
doi = {10.1371/journal.pcbi.1003457},
}
These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.