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Scalable implementation of the Wilcoxon rank sum test and the area under the receiver operating characteristic curve (also known as auROC or AUC) statistic. Interfaces to dense and sparse matrices, as well as the genomics analysis frameworks 'Seurat' and 'SingleCellExperiment'.
| Version: | 1.1.0 |
| Depends: | R (≥ 3.5.0) |
| Imports: | Rcpp, data.table, dplyr, methods, tidyr, purrr, tibble, Matrix, rlang, stats, utils |
| LinkingTo: | Rcpp, RcppArmadillo |
| Suggests: | knitr, rmarkdown, testthat, Seurat, SingleCellExperiment, SummarizedExperiment, DelayedArray, broom, BiocStyle, DESeq2 |
| Published: | 2026-09-30 |
| DOI: | 10.32614/CRAN.package.presto |
| Author: | Ilya Korsunsky |
| Maintainer: | Kamil Slowikowski <kslowikowski at gmail.com> |
| License: | GPL-3 |
| NeedsCompilation: | yes |
| Materials: | README, NEWS |
| CRAN checks: | presto results |
| Reference manual: | presto.html , presto.pdf |
| Vignettes: |
Getting started with presto (source) Pseudobulk differential expression with DESeq2 (source) |
| Package source: | presto_1.1.0.tar.gz |
| Windows binaries: | r-devel: presto_1.1.0.zip, r-release: not available, r-oldrel: presto_1.1.0.zip |
| macOS binaries: | r-release (arm64): not available, r-oldrel (arm64): not available, r-release (x86_64): presto_1.1.0.tgz, r-oldrel (x86_64): presto_1.1.0.tgz |
| Reverse suggests: | grandR, Seurat |
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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.