The hardware and bandwidth for this mirror is donated by METANET, the Webhosting and Full Service-Cloud Provider.
If you wish to report a bug, or if you are interested in having us mirror your free-software or open-source project, please feel free to contact us at mirror[@]metanet.ch.

rcites

R CMD Check codecov status Project Status: Active – The project has reached a stable, usable state and is being actively developed. ROpenSci status CRAN status CRAN downloads Zenodo DOI JOSS DOI

An R package to access information from the Speciesplus database via the Speciesplus/CITES Checklist API. The package is available for download from CRAN (stable version) and Github (development version).

Please see the release paper for background information about the Convention on International Trade in Endangered Species of Wild Fauna and Flora (CITES), the Speciesplus database and basic information about the aim of the package.

Installation

The package can be installed from CRAN:

install.packages("rcites")

The development version can be installed via the remotes :package:

remotes::install_github("ropensci/rcites")

Setup requirements and use

To set up a connection to the CITES Speciesplus database, a personal authentication token is required. Please see the vignette for details how to get a token and how to set the token for package use: Get started with rcites

Additional information about specific use examples are provided for the African bush elephant (Loxodonta africana). The package usage for querying multiple species is described in another vignette entitled ‘Bulk analysis with rcites’.

Key features

Once the token is set, the package has five key features:

Prefix information

The package functions have three different prefixes:

Citation information

When citing, please refer to both the package citation and the release paper.

Contributors

Resources

Another package dealing with data from and about CITES, providing access to its wildlife trade database: cites

While creating this package, we greatly benefited from:

  1. taxize that inspired the structuring of this repository/package;

  2. the httr vignette: Managing secrets, which is extremely helpful for packages dealing with API.

Code of Conduct

Please note that this project is released with a Contributor Code of Conduct. By participating in this project you agree to abide by its terms.

Also, please read the Terms and Conditions of Use of Speciesplus Data: https://speciesplus.net/terms-of-use.

ropensci_footer

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.