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squid: Statistical Quantification of Individual Differences

A simulation-based tool made to help researchers to become familiar with multilevel variations, and to build up sampling designs for their study. This tool has two main objectives: First, it provides an educational tool useful for students, teachers and researchers who want to learn to use mixed-effects models. Users can experience how the mixed-effects model framework can be used to understand distinct biological phenomena by interactively exploring simulated multilevel data. Second, it offers research opportunities to those who are already familiar with mixed-effects models, as it enables the generation of data sets that users may download and use for a range of simulation-based statistical analyses such as power and sensitivity analysis of multilevel and multivariate data [Allegue, H., Araya-Ajoy, Y.G., Dingemanse, N.J., Dochtermann N.A., Garamszegi, L.Z., Nakagawa, S., Reale, D., Schielzeth, H. and Westneat, D.F. (2016) <doi:10.1111/2041-210X.12659>].

Version: 0.2.1
Depends: R (≥ 4.1.0)
Imports: stats, shiny (≥ 1.6.0), shinyMatrix (≥ 0.4.0), ggplot2 (≥ 3.3.5), plotly (≥ 4.9.3), grid (≥ 4.1.1), MASS (≥ 7.3-53.1), lme4 (≥ 1.1-21), arm (≥ 1.10-1), data.table (≥ 1.1-27.1), brms (≥ 2.15.0)
Suggests: testthat
Published: 2022-01-21
DOI: 10.32614/CRAN.package.squid
Author: Hassen Allegue [aut, cre], Yimen G. Araya-Ajoy [aut], Niels J. Dingemanse [aut], Ned A. Dochtermann [aut], Laszlo Z. Garamszegi [aut], Shinichi Nakagawa [aut], Denis Reale [aut], Holger Schielzeth [aut], David F. Westneat [aut]
Maintainer: Hassen Allegue <h.all at disroot.org>
BugReports: https://github.com/squid-group/squid/issues
License: MIT + file LICENSE
URL: https://github.com/squid-group/squid, https://squid-group.github.io/squid/
NeedsCompilation: no
Materials: README NEWS
CRAN checks: squid results

Documentation:

Reference manual: squid.pdf

Downloads:

Package source: squid_0.2.1.tar.gz
Windows binaries: r-devel: squid_0.2.1.zip, r-release: squid_0.2.1.zip, r-oldrel: squid_0.2.1.zip
macOS binaries: r-release (arm64): squid_0.2.1.tgz, r-oldrel (arm64): squid_0.2.1.tgz, r-release (x86_64): squid_0.2.1.tgz, r-oldrel (x86_64): squid_0.2.1.tgz
Old sources: squid archive

Linking:

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These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.