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tidyGenR News

tidyGenR 0.1.7 (2026-02-13)

• fixed CRAN checks: tempdir and tempfiles for examples and tests, remove examples for internal ::: functions, add @value where missing.
• remove unused data objects msa and qlist.

tidyGenR 0.1.6 (2026-02-10)

• first submission to CRAN.
• trunc_amp(), includes ‘filt_name’ argument to add flexibility to output filtered names.
• x-axis scale has changed in ‘explore_dada()’
• optimization vignette added.
• ‘out_popart()’ internal ‘write_delim(quote)’ changed to “none”.
• replace absolute paths by temp paths in examples.

tidyGenR 0.1.5 (2026-01-22)

• bug fixed in ‘variant_call_dada()’, dada2 is always converted to list to prevent errors associated to loci in one sample only.

tidyGenR 0.1.4 (2026-01-16)

• ‘demultiplex(mode = ’linked’)’ has been tested with real data. The R primers needed to be reverse-complemented. Fixed.

tidyGenR 0.1.3 (2025-08-26)

• updated ‘gen_wide2genalex()’. ‘tidyr::separate_wider_delim()’ replaced with base R code.
• ‘ploidy’ attribute is kept for remove_hemizygotes

tidyGenR 0.1.2 (2025-08-26)

• updated ‘gen_wide2structure()’. ‘tidyr::separate_longer_delim()’ could not handle correctly NA’s and the code was replaced with base R.
• ‘ploidy’ attribute is kept for genotype conversions.

tidyGenR 0.1.1 (2025-08-08)

• Update NEWs and README.

tidyGenR 0.1.0 (2025-04-06)

Initial Release

• Core functions available.
• Clean .git.
• Stable version.
• Old .git was removed and fresh .git was initiated after checking the rcmdcheck did not return any error.

These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.