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tr_usda()
is defunct. The API is down for good
(#122)coral_*
functions are defunct (#124)ncbi_searcher()
fix: we weren’t including the NCBI
Entrez API key even when it was found (#120)taxa_search
: removed traitbank
option
because traits::traitbank()
used internally has completely
changed and it’s no longer feasible to do a straight-forward taxon
search for all traits in EOL’s Traitbank (#115)ncbi_searcher()
to prevent failures in some
cases (#107) thanks @zachary-fosterncbi_byid()
: ten new fields added to the output
(#101) (#102) thanks @boopsboops?traits-defunct
for more information. Deprecated functions:
eol_invasive_()
, fe_native()
,
g_invasive()
, is_native()
(#72)tr_ernest
for a dataset of Amniote
life history data (#60)tr_usda
for the USDA plants database
(#61)tr_zanne
for a dataset of plant
growth data (#73)readr > 1.0
(#76)ncbi_*()
functions to give back NA
types that match data.frame column classes to make combining easier
(#96)xml2::xml_find_one
with
xml2::xml_find_first
throughout (#97)birdlife*
functions that needed to change URL
structure due to changes in the Birdlife website (#100)traitbank()
(#79) (#80) thanks @dschlaep !ncbi_*()
fxns now use https (#95)?traits-deprecated
for more information. Deprecated
functions: eol_invasive_()
, fe_native()
,
g_invasive()
, is_native()
(#63)httr::content()
calls now explicitly setting
encoding to UTF-8
, and parsing to text
, then
manually parsing either JSON or XML later (#65)XML
with xml2
for XML parsing
(#67)ncbi_searcher()
gains new parameter fuzzy
to toggle fuzzy taxonomic ID search or exact search. (#34) (thx @mpnelsen)importFrom
) used across
all imports now. In addition, importFrom
for all non-base R
pkgs, including methods
, stats
and
utils
packages (#36)trait
parameter in traitbank()
function to pageid
, because EOL expects a page identifier,
which is associated with a taxon, not a trait. The previous parameter
name was very misleading.These binaries (installable software) and packages are in development.
They may not be fully stable and should be used with caution. We make no claims about them.