Diagnostic Index Expectation Maximisation in R
![[R logo]](../../../doc/html/Rlogo.svg)
![[Up]](../../../doc/html/left.jpg)
![[Top]](../../../doc/html/up.jpg)
Documentation for package ‘diemr’ version 1.4.1
Help Pages
| brenthis | Dataset of Butterfly Genotypes |
| CheckDiemFormat | diem input file checker |
| diem | Diagnostic Index Expectation Maximisation |
| emPolarise | Polarises a marker |
| importPolarized | Imports genomic data polarized according to the specification |
| ModelOfDiagnostic | Model of Diagnostic Marker Based on All Individual State Counts |
| myotis | Dataset of Modified Genotypes of Bats |
| pHetErrOnStateCount | Hybrid index, heterozygosity, error rate |
| plotDeFinetti | Plot the De Finetti Diagram for Polarized Genotypes |
| plotMarkerAxis | Add a Marker Axis with Chromosome Names to a Plot of Polarized Genotypes |
| plotPolarized | Plot Polarized Genotypes |
| rank2map | Convert SNP Ranks To Windows Corresponding to Mapping Distance |
| smoothPolarizedGenotypes | Smooths Polarized Genotype States |
| sStateCount | Count states in a vector |
| testdata | Dataset of Fish Genotypes |
| vcf2diem | Convert vcf files to diem format |