# Calibration Plots for the Transition Probabilities from Multistate Models

## Documentation for package ‘calibmsm’ version 1.0.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

calc_aj | Estimate Aalen-Johansen estimator for a cohort of individuals
calc_pv_aj | Estimate pseudo-values for the transition probabilities based on the Aalen-Johansen estimator
calc_weights | Calculate inverse probability of censoring weights at time 't'.
calib_blr | Estimate calibration curves for a multistate model using binary logistic regression calibration techniques and inverse probability of censoring weights.'
calib_mlr | Create data for calibration curves using a multinomial logistic regression framework with inverse probability of censoring weights
calib_pv | Estimate calibration curves for a multistate model using pseudo-values.
ebmtcal | European Group for Blood and Marrow Transplantation data
extract_ids_states | Identify patids for individuals in state j at time t
msebmtcal | European Group for Blood and Marrow Transplantation data
msebmtcal.cmprsk | European Group for Blood and Marrow Transplantation data in competing risks format, for transitions out of the initial state only
plot.calib_blr | Plots calibration curves estimated using 'calib_blr'.
plot.calib_mlr | Plots calibration scatter plots estimated using 'calib_mlr'.
plot.calib_pv | Plots calibration curves estimated using 'calib_pv'.
tp.cmprsk.j0 | Predicted risks for a competing risks model out of state j = 0
tps0 | Predicted transition probabilities out of transplant state made at time s = 0
tps100 | Predicted transition probabilities out of every state made at time s = 100