'RStudio' Addins and 'Shiny' Modules for Medical Research

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Documentation for package ‘jsmodule’ version 1.6.3

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

barServer	barServer: shiny module server for barplot.
barUI	barUI: shiny module UI for barplot
boxServer	boxServer: shiny module server for boxplot.
boxUI	boxUI: shiny module UI for boxplot
coxModule	coxModule: shiny modulde server for Cox's model.
coxUI	coxUI: shiny modulde UI for Cox's model.
csvFile	csvFile: Shiny module Server for file upload.
csvFileInput	csvFileInput: Shiny module UI for file upload.
FilePs	FilePs: Shiny module Server for file upload for propensity score matching.
FilePsInput	FilePsInput: Shiny module UI for file upload for propensity score matching.
FileRepeated	FileRepeated: File upload server module for repeated measure analysis.
FileRepeatedInput	FileRepeatedInput: File upload UI for repeated measure analysis.
FileSurvey	FileSurvey: File upload server module for survey data analysis.
FileSurveyInput	FileSurveyInput: File upload UI for survey data analysis.
forestcoxServer	forestcoxServer:shiny module server for forestcox
forestcoxUI	forestcoxUI:shiny module UI for forestcox
forestglmServer	forestglmServer:shiny module server for forestglm
forestglmUI	forestglmUI:Shiny module UI for forestglm
GEEModuleLinear	GEEModuleLinear: shiny modulde server for gaussian generalized estimating equation(GEE) using reactive data.
GEEModuleLogistic	GEEModuleLogistic: shiny modulde server for binomial gaussian generalized estimating equation(GEE) using reactive data.
GEEModuleUI	GEEModuleUI: shiny modulde UI for generalized estimating equation(GEE).
ggpairsModule	ggpairsModule: shiny module server for basic/scatter plot.
ggpairsModule2	ggpairsModule2: shiny module server for basic/scatter plot for reactive data.
ggpairsModuleUI1	ggpairsModuleUI1: Variable selection module UI for ggpairs
ggpairsModuleUI2	ggpairsModuleUI2: Option & download module UI for ggpairs
ggplotdownUI	ggplotdownUI: Option & download module UI for ggplot
histogramServer	histogramServer: shiny module server for histogram.
histogramUI	histogramUI: shiny module UI for histogram
jsBasicAddin	jsBasicAddin: Rstudio addin of jsBasicGadget
jsBasicExtAddin	jsBasicExtAddin: RStudio Addin for basic data analysis with external data.
jsBasicGadget	jsBasicGadget: Shiny Gadget of Basic Statistics in Medical Research.
jsPropensityAddin	jsPropensityAddin: Rstudio addin of jsPropensityGadget
jsPropensityExtAddin	jsPropensityExtAddin: RStudio Addin for propensity score analysis with external data.
jsPropensityGadget	jsPropensityGadget: Shiny Gadget for propensity score analysis.
jsRepeatedAddin	jsRepeatedAddin: Rstudio addin of jsRepeatedGadget
jsRepeatedExtAddin	jsRepeatedExtAddin: RStudio Addin for repeated measure analysis with external data.
jsRepeatedGadget	jsRepeatedGadget: Shiny Gadget of Repeated measure analysis.
jsSurveyAddin	jsSurveyAddin: Rstudio addin of jsSurveyGadget
jsSurveyExtAddin	jsSurveyExtAddin: RStudio Addin for survey data analysis with external data.
jsSurveyGadget	jsSurveyGadget: Shiny Gadget of survey data analysis.
kaplanModule	kaplanModule: shiny module server for kaplan-meier plot.
kaplanUI	kaplanUI: shiny module UI for kaplan-meier plot
lineServer	lineServer: shiny module server for lineplot.
lineUI	lineUI: shiny module UI for lineplot
logistic.display2	logistic.display2: Modified epiDisplay's logistic.display function.
logisticModule2	logisticModule2: Shiny modulde server for logistic regression for reactive data.
mk.lev2	mk.lev2: level generating function
mklist	mklist: function to make variable list lncluding specific variables.
mksetdiff	mksetdiff: function to make variable list excluding specific variables.
optionUI	optionUI: Option UI with icon
reclassificationJS	reclassificationJS: Function for reclassification table and statistics
regress.display2	regress.display2: modified epiDisplay's regress.display function
regressModule2	regressModule2: Shiny modulde server for linear regression for reactive data.
regressModuleUI	regressModuleUI: shiny modulde UI for linear regression.
rocModule	rocModule: shiny module server for roc analysis
rocModule2	rocModule2: shiny module server for roc analysis- input number of model as integer
rocUI	rocUI: shiny module UI for roc analysis
ROC_table	ROC_table: extract AUC, NRI and IDI information from list of roc object in pROC packages.
scatterServer	scatterServer: shiny module server for scatterplot.
scatterUI	scatterUI: shiny module UI for scatterplot
survIDINRI_helper	survIDINRI_helper: Helper function for IDI.INF.OUT in survIDINRI packages
tb1module	tb1module: table 1 shiny module server.
tb1module2	tb1module2: table 1 shiny module server for reactive data.
tb1moduleUI	tb1moduleUI: table 1 module UI.
tb1simple	tb1simple: tb1 module server for propensity score analysis
tb1simple2	tb1simple2: tb1 module for propensity score analysis for reactive data
tb1simpleUI	tb1simpleUI : tb1 module UI for propensity score analysis
timeROChelper	timeROChelper: Helper function for timerocModule
timerocModule	timerocModule: shiny module server for time-dependent roc analysis
timerocModule2	timerocModule: shiny module server for time-dependent roc analysis
timerocUI	timerocUI: shiny module UI for time-dependent roc analysis
timeROC_table	timeROC_table: extract AUC information from list of timeROChelper object.