Pedigree Validation Genetic Composition of Diploids & Polyploids
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Documentation for package ‘BIGpopA’ version 2.1.0
Help Pages
| allele_freq_poly | Compute Allele Frequencies for Populations |
| check_ped | Check and Correct Common Pedigree Errors |
| find_parentage | Find Parentage Assignments for Progeny |
| ped_to_dosage | Convert a PLINK .ped File to a BIGpopA Genotype Matrix |
| solve_composition_poly | Compute Genome-Wide Breed Composition |
| validate_pedigree | Validate Pedigree Trios Using Mendelian Error Analysis |
| vcf_to_dosage | Convert a VCF File to a BIGpopA Genotype Matrix |