| Biweight_permute | Biweight Method Permutation Test Performs a permutation test for the Biweight method. |
| Huber_permute | Huber Method Permutation Test Performs a permutation test for the Huber method. |
| ILMS_permute | The Improved Least Median of Squares (ILMS) Permutation Test Performs a permutation test for the ILMS method. |
| LMS_estimator | Least median of squares (LMS) method Align two matrices using the LMS. |
| LMS_LTS_estimator | Improved Least median of squares (ILMS) method Align two matrices using the ILMS. |
| LMS_permute | The Least Median of Squares (LMS) Permutation Test Performs a permutation test for the LMS method. |
| LTS_estimator | Least trimmed squares (LTS) method Align two matrices using the ILMS. |
| LTS_permute | The Least Trimmed Squares (LTS) Permutation Test Performs a permutation test for the LTS method. |
| majorization | Huber and Biweight methods Align two matrices using the Huber and Biweight loss functions via iterative majorization. |
| majorization_tuned | Huber and Biweight Methods with Automatic Tuning Constant Selection Align two matrices using Huber or biweight loss functions via iterative majorization, with automatic selection of the tuning constant. |
| MM2_estimator_no_reflection | Repeated Median Method without reflection Align two matrices using repeated median method that cannot deal with reflection |
| MM2_estimator_with_reflection | Repeated Median Method with reflection Align two matrices using the repeated median method while allowing for reflection. This method is recommended for practical applications where reflected configurations may occur. |
| MM2_permute | Repeated Median Method Permutation Test Performs a permutation test for the repeated median method. |
| Procrustes_fun | The standard Procrustes analysis Align two matrices using Procrustes analysis |
| Procrustes_permute | Standard Procrustes Analysis Permutation Test Performs a permutation test for the standard Procrustes analysis. |
| S_estimator | S-estimator method Align two matrices using the S-estimator. |
| S_permute | S-estimator Permutation Test Performs a permutation test for the S-estimator method. |