Integral Analysis of Diversity Based on Hill Numbers
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Documentation for package ‘hilldiv3’ version 3.0.0
Help Pages
| gut_counts | Simulated gut microbiome MAG count table |
| gut_traits | Functional traits for the simulated gut MAGs |
| gut_tree | Phylogeny for the simulated gut MAGs |
| hilldiss | Hill numbers-based dissimilarity |
| hilldiv | Hill numbers computation |
| hilleven | Hill-number evenness |
| hillpair | Pairwise Hill numbers-based dissimilarity |
| hillpart | Hill numbers diversity partitioning |
| hillprof | Diversity profile across a range of orders |
| hillred | Hill numbers redundancy |
| hillsim | Hill numbers-based similarity |
| match_data | Match and align a count table to a tree or distance matrix |
| plot.hill_profile | Plot a diversity profile |
| plot.hill_redundancy | Plot a redundancy fit |
| traits2dist | Convert a trait table into a distance matrix |
| tss | Total Sum Scaling normalisation |