Variable Selection using the Pivotal Information Criterion


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Documentation for package ‘picreg’ version 0.1.2

Help Pages

assess Assess performance of a 'pic' fit.
assess.pic Assess performance of a 'pic' fit.
baseline_functions Breslow baseline cumulative hazard and survival.
BinomialExample Small binary-classification dataset for the Binomial section of the vignette.
coef.pic Coefficients of a fitted pic model.
concordance_index Harrell's concordance index.
CoxExample Small survival dataset for the Cox section of the vignette.
cox_partial_log_likelihood Breslow partial log-likelihood (negative, normalised by 'n').
feature_effects_on_survival Effect of one feature on the Cox survival curve.
lambda_pdb Pivotal Detection Boundary regularisation selector
pdb_asymptotic Asymptotic behaviour of the PDB null distribution.
pdb_summary Summary of the PDB lambda selector.
phase_transition Phase-transition analysis of support recovery.
pic Sparse regression via pivotal loss and PDB lambda selection
pic_families GLM families for pic — descriptor layer.
pic_methods S3 methods for fitted pic objects.
pic_penalties Sparsity-inducing penalties for pic.
pic_plots Plot methods for pic fits and diagnostics.
pic_survival Survival utilities for the Cox family.
plot.pic Horizontal lollipop plot of the non-zero coefficients of a pic fit.
plot.pic.lambda_pdb Plot the PDB null distribution.
plot.pic.pdb_asymptotic Plot of the PDB asymptotic behaviour.
plot.pic.phase_transition Phase-transition plot for a 'pic.phase_transition' object.
plot_baseline Plot Cox baseline cumulative hazard and baseline survival.
plot_survival_curves Plot subject-specific Cox survival curves.
predict.pic Linear predictor / response prediction for a pic fit.
predict_survival_function Survival curves for new data from a fitted Cox pic model.
print.pic.coef Print a 'pic.coef' table.
print.pic.family Pretty-print a pic family descriptor.
print.pic.pdb_asymptotic Print PDB asymptotic diagnostic.
print.pic.phase_transition Print phase-transition analysis.
QuickStartExample Small Gaussian dataset for the introductory vignette.