Single-Cell Network Propensity Matching

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Documentation for package ‘scNPM’ version 1.0.6

• DESCRIPTION file.
• Package NEWS.

Help Pages

cell	Cell-Level Metadata (AMD Example Data)
cols_to_MR	Column Indices of MR Cells (AMD Example Data)
cols_to_PR	Column Indices of PR Cells (AMD Example Data)
compute_qf_smd	Compute the SMD of the Network Quadratic Form for Matched Cluster Pairs
goal_gene	Target Gene Names (AMD Example Data)
goal_gene_mt	Top-50 Gene Expression Matrix (AMD Example Data)
mt	Full Gene Expression Matrix (AMD Example Data)
plot_diff_network	Plot Differential Gene Regulatory Network (Combined/Separate Mode)
plot_group_network	Plot a Selected Group Network
run_scNPM	Run Single-Cell Network Propensity Matching (scNPM)
select_differential_edges	Select Differential Edges by Posterior Directional Error
select_group_edges	Select Group Networks by Posterior Expected False Discovery Proportion