Summarise and Visualise Characteristics of Patients in the OMOP CDM

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Documentation for package ‘CohortCharacteristics’ version 0.1.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

mockCohortCharacteristics	It creates a mock database for testing PatientProfiles package
optionsTableCharacteristics	Additional arguments for the function tableCharacteristics.
optionsTableCohortOverlap	Additional arguments for the function tableCohortOverlap.
optionsTableCohortTiming	Additional arguments for the function tableCohortTiming.
plotCharacteristics	Create a ggplot from the output of summariseCharacteristics. 'r lifecycle::badge("experimental")'
plotCohortOverlap	Plot the result of summariseCohortOverlap.
plotCohortTiming	Plot summariseCohortTiming results.
plotLargeScaleCharacteristics	create a ggplot from the output of summariseLargeScaleCharacteristics.
summariseCharacteristics	Summarise characteristics of individuals
summariseCohortCounts	Summarise counts for each different cohort. You can add a list of stratifications.
summariseCohortIntersect	Summarise cohort intersection information
summariseCohortOverlap	Summarise cohort overlap
summariseCohortTiming	Summarise cohort timing
summariseConceptIntersect	Summarise concept intersect with a cohort_table
summariseLargeScaleCharacteristics	This function is used to summarise the large scale characteristics of a cohort table
summariseTableIntersect	Summarise table intersection information
tableCharacteristics	Format a summarised_characteristics object into a visual table.
tableCohortOverlap	Format a summariseOverlapCohort result into a visual table.
tableCohortTiming	Format a summariseCohortTiming result into a visual table.
tableLargeScaleCharacteristics	Format a summarised_large_scale_characteristics object into a visual table.