Package: RUVIIIC
Type: Package
Title: RUV-III-C
Version: 1.0.19
Date: 2021-04-14
Author: Rohan Shah [aut, cre],
  Sean Peters [ctb],
  Qing Zhong [ctb],
  Children's Medical Research Institute [cph]
Authors@R: c(person("Rohan", "Shah", role = c("aut", "cre"), email = "rshah@cmri.org.au"), person("Sean", "Peters", role = "ctb"), person("Qing", "Zhong", role = "ctb"), person("Children's Medical Research Institute", role = "cph"))
Maintainer: Rohan Shah <rshah@cmri.org.au>
Description: Variations of Remove Unwanted Variation-III (RUV-III) known as RUV-III-C (RUV-III Complete). RUV-III performs normalisation using negative control variables and replication. RUV-III-C extends this method to cases where the data contains missing values, by applying RUV-III to complete subsets of the data. Originally designed for SWATH-MS proteomics datasets. 
    Poulos et al. (2020) <doi:10.1038/s41467-020-17641-3>. 
License: MIT + file LICENSE
Encoding: UTF-8
LazyLoad: yes
LazyData: yes
SystemRequirements: C++11
LinkingTo: Rcpp, RcppEigen, RSpectra, RcppProgress
Suggests: ruv, testthat
Depends: R (>= 3.5), RSpectra, progress
Collate: 'RcppExports.R' 'RUVIII_C.R' 'RUVIII_C_Varying.R' 'data.R'
        'roxygen.R' 'threads.R'
RoxygenNote: 7.1.1
NeedsCompilation: yes
Packaged: 2021-04-14 04:40:31 UTC; rshah
Repository: CRAN
Date/Publication: 2021-04-23 15:00:09 UTC
Built: R 4.3.0; x86_64-apple-darwin20; 2023-07-11 23:25:08 UTC; unix
Archs: RUVIIIC.so.dSYM
