SAMtool-package	SAMtool-package
Assessment	Assessment-class
Assessment-class	Assessment-class
calculate_TAC	TAC_MSY
cDD	cDD
cDD_SS	cDD
check_RCMdata	RCM
compare_models	compare_models
compare_RCM	plot.RCModel
Data-rich-MP	Model-based-MP
DDSS_4010	Model-based-MP
DDSS_75MSY	Model-based-MP
DDSS_MSY	Model-based-MP
DD_SS	DD_TMB
DD_TMB	DD_TMB
diagnostic	diagnostic
diagnostic_AM	diagnostic
getinds	getinds
HCR40_10	HCR_ramp
HCR60_20	HCR_ramp
HCR80_40MSY	HCR_ramp
HCRlin	HCRlin
HCR_escapement	HCR_escapement
HCR_FB	HCR_FB
HCR_fixedF	HCR_fixedF
HCR_MSY	HCR_MSY
HCR_ramp	HCR_ramp
HCR_segment	HCR_segment
mahplot	mahplot
make_interim_MP	make_MP
make_MP	make_MP
make_projection_MP	make_MP
Model-based-MP	Model-based-MP
MP	Model-based-MP
pcod	pcod
Perfect	Shortcut
plot,Assessment,missing-method	plot.Assessment
plot,Assessment,retro-method	plot.Assessment
plot,prof,missing-method	plot.prof
plot,RCModel,missing-method	plot.RCModel
plot,retro,missing-method	plot.retro
plot.Assessment	plot.Assessment
plot.prof	plot.prof
plot.RCModel	plot.RCModel
plot.retro	plot.retro
plot_betavar	plot_betavar
plot_composition	plot_composition
plot_crosscorr	plot_crosscorr
plot_lognormalvar	plot_lognormalvar
plot_residuals	plot_residuals
plot_SR	plot_SR
plot_steepness	plot_steepness
plot_timeseries	plot_timeseries
posterior	posterior
posterior,Assessment-method	posterior
posterior,RCModel-method	posterior
posterior.Assessment	posterior
posterior.RCModel	posterior
PRBcalc	PRBcalc
prelim_AM	prelim_AM
Probs	Probs
prof	prof-class
prof-class	prof-class
profile	profile
profile,Assessment-method	profile
profile,RCModel-method	profile
project	project-class
project-class	project-class
projection	projection
RCM	RCM
RCM,OM,Data-method	RCM
RCM,OM,list-method	RCM
RCM,OM,RCMdata-method	RCM
RCM2MOM	RCM2MOM
RCMdata	RCMdata-class
RCMdata-class	RCMdata-class
RCModel	RCModel-class
RCModel-class	RCModel-class
RCMstan	posterior
RCM_assess	RCM_assess
retro	retro-class
retro-class	retro-class
retrospective	retrospective
retrospective,Assessment-method	retrospective
retrospective,RCModel-method	retrospective
retrospective_AM	retrospective_AM
SAMtool	SAMtool-package
SCA	SCA
SCA2	SCA
SCA_4010	Model-based-MP
SCA_75MSY	Model-based-MP
SCA_CAL	SCA_CAL
SCA_DDM	SCA_DDM
SCA_MSY	Model-based-MP
SCA_Pope	SCA
SCA_RWM	SCA_RWM
Shortcut	Shortcut
Shortcut2	Shortcut
sim	sim-class
sim-class	sim-class
simulate	simulate
simulate,Assessment-method	simulate
simulate,RCModel-method	simulate
simulate.Assessment	simulate
simulate.RCModel	simulate
SP	SP
SP_4010	Model-based-MP
SP_75MSY	Model-based-MP
SP_Fox	SP
SP_MSY	Model-based-MP
SP_production	SP_production
SP_SS	SP
SSS	SSS
SSS_4010	Model-based-MP
SSS_75MSY	Model-based-MP
SSS_MSY	Model-based-MP
summary,Assessment-method	summary.Assessment
summary,retro-method	plot.retro
summary.Assessment	summary.Assessment
summary.retro	plot.retro
swordfish	swordfish
TAC_MSY	TAC_MSY
userguide	userguide
VPA	VPA
