Package: admix
Title: Package Admix for Admixture (aka Contamination) Models
Version: 2.1-2
Date: 2023-07-11
Authors@R: c(
    person(given = "Xavier",
           family = "Milhaud",
           role = c("aut", "cre"),
           email = "xavier.milhaud.research@gmail.com"),
    person(given = "Pierre",
           family = "Vandekerkhove",
           role = "ctb"),
    person(given = "Denys",
           family = "Pommeret",
           role = "ctb"),
    person(given = "Yahia",
           family = "Salhi",
           role = "ctb")
           )
Description: Implements techniques to estimate the unknown quantities related 
    to two-component admixture models, where the two components can belong to any
    distribution (note that in the case of multinomial mixtures, the two components
    must belong to the same family). Estimation methods depend on the assumptions 
    made on the unknown component density (see Bordes and Vandekerkhove (2010) <doi:10.3103/S1066530710010023>; 
    Patra and Sen (2016) <doi:10.1111/rssb.12148>); Milhaud, Pommeret, Salhi and Vandekerkhove 
    (2022) <doi:10.1016/j.jspi.2021.05.010>). In practice, one can estimate both the 
    mixture weight and the unknown component density in a wide variety of frameworks.
    On top of that, hypothesis tests can be performed in one and two-sample contexts 
    to test the unknown component density (see Milhaud, Pommeret, Salhi, Vandekerkhove (2023)).
    Finally, clustering of unknown mixture components is also feasible in a K-samples setting.
License: GPL (>= 3)
URL: https://github.com/XavierMilhaud/admix
BugReports: https://github.com/XavierMilhaud/admix/issues
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.2.3
Imports: base, cubature, fdrtool, graphics, Iso, MASS, methods,
        orthopolynom, pracma, Rcpp, stats, utils
Suggests: rmutil, doParallel, foreach, evd, logitnorm, flexsurv, plyr,
        reshape2, gridExtra, lattice, testthat (>= 3.0.0), knitr,
        rmarkdown, markdown, spelling
Depends: R (>= 2.10)
LinkingTo: Rcpp
Config/testthat/edition: 3
VignetteBuilder: knitr
Language: en-US
NeedsCompilation: yes
Packaged: 2023-07-11 12:53:51 UTC; XM
Author: Xavier Milhaud [aut, cre],
  Pierre Vandekerkhove [ctb],
  Denys Pommeret [ctb],
  Yahia Salhi [ctb]
Maintainer: Xavier Milhaud <xavier.milhaud.research@gmail.com>
Repository: CRAN
Date/Publication: 2023-07-12 22:50:15 UTC
Built: R 4.3.0; x86_64-apple-darwin20; 2023-07-13 03:25:52 UTC; unix
Archs: admix.so.dSYM
