Interface to 'dgpsi' for Deep and Linked Gaussian Process Emulations

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Documentation for package ‘dgpsi’ version 2.2.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

alm	Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using ALM
alm.bundle	Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using ALM
alm.dgp	Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using ALM
alm.gp	Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using ALM
combine	Combine layers
continue	Continue the training of a DGP emulator
design	Sequential design of a (D)GP emulator or a bundle of (D)GP emulators
design.bundle	Sequential design of a (D)GP emulator or a bundle of (D)GP emulators
design.dgp	Sequential design of a (D)GP emulator or a bundle of (D)GP emulators
design.gp	Sequential design of a (D)GP emulator or a bundle of (D)GP emulators
dgp	Deep Gaussian process emulator construction
draw	Validation plots of a sequential design
draw.bundle	Validation plots of a sequential design
draw.dgp	Validation plots of a sequential design
draw.gp	Validation plots of a sequential design
gp	Gaussian process emulator construction
Hetero	Initialize a heteroskedastic Gaussian likelihood node
init_py	'python' environment initialization
kernel	Initialize a Gaussian process node
lgp	Linked (D)GP emulator construction
mice	Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using MICE
mice.bundle	Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using MICE
mice.dgp	Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using MICE
mice.gp	Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using MICE
NegBin	Initialize a negative Binomial likelihood node
nllik	Calculate negative predicted log-likelihood
pack	Pack GP and DGP emulators into a bundle
pei	Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using PEI
pei.bundle	Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using PEI
pei.dgp	Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using PEI
pei.gp	Locate the next design point for a (D)GP emulator or a bundle of (D)GP emulators using PEI
plot	Validation plots of a constructed GP, DGP, or linked (D)GP emulator
plot.dgp	Validation plots of a constructed GP, DGP, or linked (D)GP emulator
plot.gp	Validation plots of a constructed GP, DGP, or linked (D)GP emulator
plot.lgp	Validation plots of a constructed GP, DGP, or linked (D)GP emulator
Poisson	Initialize a Poisson likelihood node
predict	Predictions from GP, DGP, or linked (D)GP emulators
predict.dgp	Predictions from GP, DGP, or linked (D)GP emulators
predict.gp	Predictions from GP, DGP, or linked (D)GP emulators
predict.lgp	Predictions from GP, DGP, or linked (D)GP emulators
read	Load the stored emulator
set_imp	Reset number of imputations for a DGP emulator
set_linked_idx	Set linked indices
set_seed	Random seed generator
summary	Summary of a constructed GP, DGP, or linked (D)GP emulator
summary.dgp	Summary of a constructed GP, DGP, or linked (D)GP emulator
summary.gp	Summary of a constructed GP, DGP, or linked (D)GP emulator
summary.lgp	Summary of a constructed GP, DGP, or linked (D)GP emulator
trace_plot	Plot of DGP model parameter traces
unpack	Unpack a bundle of (D)GP emulators
update	Update a GP or DGP emulator
update.dgp	Update a GP or DGP emulator
update.gp	Update a GP or DGP emulator
validate	Validate a constructed GP, DGP, or linked (D)GP emulator
validate.dgp	Validate a constructed GP, DGP, or linked (D)GP emulator
validate.gp	Validate a constructed GP, DGP, or linked (D)GP emulator
validate.lgp	Validate a constructed GP, DGP, or linked (D)GP emulator
window	Trim the sequences of model parameters of a DGP emulator
write	Save the constructed emulator