Automated Spectral Deconvolution, Alignment, and Metabolite
Identification in GC/MS-Based Untargeted Metabolomics
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Documentation for package ‘erah’ version 1.1.2
Help Pages
| alignComp | Alignment of compounds |
| alignList | Alignment list |
| compInfo | Information of a Compound |
| computeRIerror | Retention Index Error Computation |
| createdt | Creating Experiment Tables |
| dataList | Data list |
| deconvolveComp | Deconvolution of compounds in samples |
| eRah_DB-class | Class '"eRah_DB"' |
| expClasses | Experiment classes |
| export2CEF | Export spectra to CEF |
| export2MSP | Export spectra to MSP |
| findComp | Find a Compound |
| identifyComp | Identification of compounds |
| idList | Identification list |
| importGMD | Import MSP files from GMD to R |
| importMSP | Import MSP files to R |
| MetaboSet-class | Class '"MetaboSet"' |
| metaData | Metadata |
| mslib | MassBank Spectral Library |
| newExp | New Experiment |
| phenoData | Show Phenotyphe data |
| plotAlign | Plotting chromatophic profile with and without alignement |
| plotChr | Plotting sample chromatogram |
| plotProfile | Plotting chromatophic profile |
| plotSpectra | Plotting spectra |
| RawDataParameters-class | Class '"RawDataParameters"' |
| recMissComp | Missing compound recovery |
| sampleInfo | Information of the samples |
| setAlPar | Set Alignment Parameters |
| setDecPar | Set Software Parameters |
| show.MetaboSet | Show MetaboSet object |