Phylogenetic Structural Equation Model

---

Documentation for package ‘phylosem’ version 1.0.2

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

AIC.phylosem	Calculate Akaike Information Criterion from marginal likelihood
as_fitted_DAG	Convert output from package phylosem to phylopath
as_phylo4d	Convert output from package phylosem to phylo4d object
as_sem	Convert output from package phylosem to sem
average	Choose model
average.compare_phylosem	Choose model
best	Extract best fitted model
best.compare_phylosem	Extract best fitted model
choice	Choose model
choice.compare_phylosem	Choose model
coef.phylosem	Extract path coefficients
compare_phylosem	Compare phylogenetic structural equation models
fit_tmb	Optimize a TMB model
list_parameters	List fixed and random effects
parse_path	Parse path
phylosem	Fit phylogenetic structural equation model
print.phylosem	Print parameter estimates
summary.phylosem	Summarize phylosem
TMBAIC	Calculate marginal AIC for a fitted model