dbd |
Decompress Byte Data |
gid |
Infer Sample ID from a symmetric matrix |
lc |
Line Count |
readBED |
Read BED file |
readBIM |
Read BIM file |
readBSM |
Read Binary Symmetric Matrix (BSM) |
readFAM |
Read FAM file |
readGRM |
Read Genetic Related Matrix (GRM) of GCTA |
readIBS |
Read PLINK Binary IBS matrix |
readREL |
Read PLINK Binary REL matrix |
readVCM |
Read Variant Count Matrix (VCM) accompanying a GCTA GRM |
saveBSM |
Save Symmetric Matrix to Binary |
saveGRM |
Save symmetic matrix to GCTA GRM format. |
scanBED |
Scan genotypes in PLINK BED(s) |
testReadBED |
Test BED Reader |
testReadBSM |
Test Genetic Relatedness Matrix Reader |
testScanBED |
Test BED Scanner |