qPCR Data Analysis

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Documentation for package ‘rtpcr’ version 1.0.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

data_1factor	A sample one factor qPCR dataset
data_2factor	A sample two factor qPCR dataset
data_2factorBlock	A sample two factor qPCR data set with blocking factor
data_3factor_a	A sample multi-factorial qPCR dataset
data_3factor_b	A three-factorial sample qPCR data
data_efficiency	A sample dataset of amplification efficiency qPCR data.
data_ttest	A sample two conditional qPCR data
data_ttest2	A sample data with one target and two reference genes
data_withTechRep	A sample data with technical replicates
efficiency	efficiency, standard curves and related statistics
meanTech	Calculating mean of technical replicates
multiplot	Multiple plot function
oneFACTORplot	Bar plot of the relative gene expression from a one-factor experiment
qpcrANCOVA	ANCOVA and ANOVA on a factorial design plus bar plot of FC
qpcrANOVA	Analysis of Variance of RE values based on CRD
qpcrTTEST	Analysis of the fold change (FC) of target genes assessed under two conditions.
qpcrTTESTplot	Bar plot of the average fold change of the target genes
threeFACTORplot	Bar plot of the relative gene expression (RE) from a three-factor experiment
twoFACTORplot	Bar plot of the relative gene expression (RE) from a two-factor experiment