Package: tern
Title: Create Common TLGs Used in Clinical Trials
Version: 0.9.0
Date: 2023-09-01
Authors@R: c(
    person("Joe", "Zhu", , "joe.zhu@roche.com", role = c("aut", "cre")),
    person("Daniel", "Sabanés Bové", , "daniel.sabanes_bove@roche.com", role = "aut"),
    person("Jana", "Stoilova", , "jana.stoilova@roche.com", role = "aut"),
    person("Heng", "Wang", , "wang.heng@gene.com", role = "aut"),
    person("Francois", "Collin", role = "aut"),
    person("Adrian", "Waddell", , "adrian.waddell@gene.com", role = "aut"),
    person("Pawel", "Rucki", , "pawel.rucki@roche.com", role = "aut"),
    person("Chendi", "Liao", , "chendi.liao@roche.com", role = "aut"),
    person("Jennifer", "Li", , "li.jing@gene.com", role = "aut"),
    person("F. Hoffmann-La Roche AG", role = c("cph", "fnd"))
  )
Description: Table, Listings, and Graphs (TLG) library for common outputs
    used in clinical trials.
License: Apache License 2.0
URL: https://github.com/insightsengineering/tern
BugReports: https://github.com/insightsengineering/tern/issues
Depends: R (>= 3.6), rtables (>= 0.6.3)
Imports: broom, car, checkmate, cowplot, dplyr, emmeans (>= 1.4.5),
        forcats (>= 1.0.0), formatters (>= 0.5.2), ggplot2 (>= 3.4.0),
        grid, gridExtra, gtable, labeling, lifecycle, magrittr,
        methods, Rdpack, rlang, scales, stats, survival (>= 3.2-13),
        tibble, tidyr, utils
Suggests: knitr, lattice, lubridate, nestcolor (>= 0.1.1), rmarkdown,
        stringr, testthat (>= 3.0), vdiffr (>= 1.0.0)
VignetteBuilder: knitr
RdMacros: lifecycle, Rdpack
Config/Needs/website: insightsengineering/nesttemplate
Config/testthat/edition: 3
Encoding: UTF-8
Language: en-US
LazyData: true
RoxygenNote: 7.2.3
Collate: 'formatting_functions.R' 'abnormal.R' 'abnormal_by_baseline.R'
        'abnormal_by_marked.R' 'abnormal_by_worst_grade.R'
        'abnormal_by_worst_grade_worsen.R'
        'analyze_colvars_functions.R' 'analyze_functions.R'
        'analyze_variables.R' 'analyze_vars_in_cols.R'
        'argument_convention.R' 'combination_function.R'
        'compare_variables.R' 'control_incidence_rate.R'
        'control_logistic.R' 'control_step.R' 'control_survival.R'
        'count_cumulative.R' 'count_missed_doses.R'
        'count_occurrences.R' 'count_occurrences_by_grade.R'
        'count_patients_events_in_cols.R' 'count_patients_with_event.R'
        'count_patients_with_flags.R' 'count_values.R'
        'cox_regression.R' 'cox_regression_inter.R' 'coxph.R'
        'd_pkparam.R' 'data.R' 'decorate_grob.R'
        'desctools_binom_diff.R' 'df_explicit_na.R'
        'estimate_multinomial_rsp.R' 'estimate_proportion.R'
        'fit_rsp_step.R' 'fit_survival_step.R' 'g_forest.R'
        'g_lineplot.R' 'g_step.R' 'g_waterfall.R'
        'h_adsl_adlb_merge_using_worst_flag.R'
        'h_biomarkers_subgroups.R' 'h_cox_regression.R'
        'h_logistic_regression.R' 'h_map_for_count_abnormal.R'
        'h_pkparam_sort.R' 'h_response_biomarkers_subgroups.R'
        'h_response_subgroups.R' 'h_stack_by_baskets.R' 'h_step.R'
        'h_survival_biomarkers_subgroups.R'
        'h_survival_duration_subgroups.R' 'incidence_rate.R'
        'individual_patient_plot.R' 'kaplan_meier_plot.R'
        'logistic_regression.R' 'missing_data.R' 'odds_ratio.R'
        'package.R' 'prop_diff.R' 'prop_diff_test.R'
        'prune_occurrences.R' 'response_biomarkers_subgroups.R'
        'response_subgroups.R' 'riskdiff.R' 'rtables_access.R'
        'score_occurrences.R' 'split_cols_by_groups.R' 'stat.R'
        'summarize_ancova.R' 'summarize_change.R' 'summarize_colvars.R'
        'summarize_coxreg.R' 'summarize_functions.R'
        'summarize_glm_count.R' 'summarize_num_patients.R'
        'summarize_patients_exposure_in_cols.R' 'summary_stats.R'
        'survival_biomarkers_subgroups.R' 'survival_coxph_pairwise.R'
        'survival_duration_subgroups.R' 'survival_time.R'
        'survival_timepoint.R' 'utils.R' 'utils_checkmate.R'
        'utils_factor.R' 'utils_grid.R' 'utils_rtables.R'
NeedsCompilation: no
Packaged: 2023-09-01 08:58:20 UTC; rstudio
Author: Joe Zhu [aut, cre],
  Daniel Sabanés Bové [aut],
  Jana Stoilova [aut],
  Heng Wang [aut],
  Francois Collin [aut],
  Adrian Waddell [aut],
  Pawel Rucki [aut],
  Chendi Liao [aut],
  Jennifer Li [aut],
  F. Hoffmann-La Roche AG [cph, fnd]
Maintainer: Joe Zhu <joe.zhu@roche.com>
Repository: CRAN
Date/Publication: 2023-09-01 09:20:02 UTC
Built: R 4.3.0; ; 2023-09-01 12:12:03 UTC; unix
