Multi-Reader, Multi-Case Analysis Methods (ROC, Agreement, and Other Metrics)

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Documentation for package ‘iMRMC’ version 2.0.0

• DESCRIPTION file.
• Package NEWS.

Help Pages

convertDFtoDesignMatrix	Convert an MRMC data frame to a design matrix
convertDFtoScoreMatrix	Convert an MRMC data frame to a score matrix
createGroups	Assign a group label to items in a vector
createIMRMCdf	Convert a data frame with all needed factors to doIMRMC formatted data frame
deleteCol	Delete a data frame column
dfMRMC_example	Example of iMRMC formatted data frame
doAUCmrmc	MRMC analysis for arbitrary design dataset
doIMRMC	MRMC analysis for arbitrary design dataset
doIMRMC_java	MRMC analysis of the area under the ROC curve
doROCavg	Empirically average over multiple empirical ROC curves
doROCcurveMRMC	Create a standard set of ROC curves from an MRMC data frame
doROCxy	Create empirical ROC curve
doROCxyMRMC	Create empirical ROC curve from an MRMC formatted data frame
extractPairedComparisonsBRBM	Extract between-reader between-modality pairs of scores
extractPairedComparisonsWRBM	Extract within-reader between-modality pairs of scores
getBRBM	Get between-reader, between-modality paired data from an MRMC data frame
getMRMCdataset	Import MRMC dataset from the web (https://github.com/DIDSR/iMRMC/wiki/iMRMC-Datasets)
getMRMCscore	Get a score from an MRMC data frame
getWRBM	Get within-reader, between-modality paired data from an MRMC data frame
init.lecuyerRNG	Initialize the l'Ecuyer random number generator
laBRBM	MRMC analysis of between-reader between-modality limits of agreement
laWRBM	MRMC analysis of within-reader between-modality limits of agreement
renameCol	Rename a data frame column name or a list object name
roc2binary	Convert ROC data formatted for doIMRMC to TPF and FPF data formatted for doIMRMC
roeMetzConfigs	roeMetzConfigs
sim.gRoeMetz	Simulate an MRMC data set of an ROC experiment comparing two modalities
sim.gRoeMetz.config	Create a configuration object for the sim.gRoeMetz program
simMRMC	Simulate an MRMC data set
simRoeMetz.example	Simulates a sample MRMC ROC experiment
successDFtoROCdf	Convert an MRMC data frame of successes to one formatted for doIMRMC
undoIMRMCdf	Convert a doIMRMC formatted data frame to a standard data frame with all factors.
uStat11	Analysis of U-statistics degree 1,1
uStat11.conditionalD	Analysis of U-statistics degree 1,1
uStat11.diff	Create the kernel and design matrices for uStat11
uStat11.identity	Create the kernel and design matrices for uStat11
uStat11.jointD	Analysis of U-statistics degree 1,1