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# tcpl: The ToxCast Data Analysis Pipeline Supporting Accessible Bioactivity Data for Toxicology

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## Welcome to the GitHub repository for the tcpl package.

<a href="https://cran.r-project.org/package=tcpl"><img src="vignettes/img/tcpl_hex.png" width="200" align="right" /></a>

The ToxCast Data Analysis Pipeline (tcpl) is an R package that manages,
curve-fits, plots, and stores ToxCast data to populate its linked MySQL
database, invitrodb. The package was developed for the chemical
screening data generated by the [US EPA’s Toxicity Forecaster (ToxCast)
program](https://www.epa.gov/comptox-tools/toxicity-forecasting-toxcast).
tcpl can be used to support diverse chemical screening efforts.

If you are interested in contributing or want to report a bug, please
submit a issue or start a discussion. See
[CONTRIBUTING](https://github.com/USEPA/CompTox-ToxCast-tcpl/blob/dev/CONTRIBUTING.md)
for more information.

To install the current development version, run the following command:

    devtools::install_github("USEPA/CompTox-ToxCast-tcpl")

### Disclaimer

The United States Environmental Protection Agency (EPA) GitHub project
code is provided on an “as is” basis and the user assumes responsibility
for its use. EPA has relinquished control of the information and no
longer has responsibility to protect the integrity, confidentiality, or
availability of the information. Any reference to specific commercial
products, processes, or services by service mark, trademark,
manufacturer, or otherwise, does not constitute or imply their
endorsement, recommendation or favoring by EPA. The EPA seal and logo
shall not be used in any manner to imply endorsement of any commercial
product or activity by EPA or the United States Government.
